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PLM1_60_b1_redo_sep16_scaffold_1241

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1241_1
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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2..2179
DNA (2178bp) protein (726aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
hypothetical protein Tax=Longispora albida RepID=UPI00037D8A1A
ATP-binding protein
PLM1_60_b1_redo_sep16_scaffold_1241_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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2176..2784
DNA (609bp) protein (203aa)
histidine kinase Tax=Streptomyces sp. AA1529 RepID=UPI0002D6FCB0
Response regulator containing a CheY-like receiver domain and an HD-GYP domain {ECO:0000313|EMBL:EXG80148.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
response regulator receiver protein
PLM1_60_b1_redo_sep16_scaffold_1241_3
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2731..3192)
DNA (462bp) protein (154aa)
Putative regulatory protein (Modular protein) Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JXL4_STREN
regulatory protein
Putative regulatory protein (Modular protein) {ECO:0000313|EMBL:CCB77440.1}; Regulatory protein {ECO:0000313|EMBL:AEW97116.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
PLM1_60_b1_redo_sep16_scaffold_1241_4
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3409..5061)
DNA (1653bp) protein (551aa)
Peptidase S1 and S6, chymotrypsin/Hap Tax=Frankia sp. (strain CcI3) RepID=Q2JGX9_FRASC
peptidase S1 and S6, chymotrypsin/Hap
Peptidase S1 and S6, chymotrypsin/Hap {ECO:0000313|EMBL:ABD09463.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM1_60_b1_redo_sep16_scaffold_1241_5
unknown

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comp(5134..5886)
DNA (753bp) protein (251aa)
hypothetical protein Tax=Longispora albida RepID=UPI000367E7A9
PLM1_60_b1_redo_sep16_scaffold_1241_6
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5992..6903)
DNA (912bp) protein (304aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI000363A6AF
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:EXG80678.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
NAD-dependent epimerase/dehydratase
PLM1_60_b1_redo_sep16_scaffold_1241_7
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(7191..8519)
DNA (1329bp) protein (443aa)
Extracellular chitinase II {ECO:0000313|EMBL:CCH19468.1}; EC=3.2.1.14 {ECO:0000313|EMBL:CCH19468.1};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
chitinase (EC:3.2.1.14)
Extracellular chitinase II Tax=Micromonospora lupini str. Lupac 08 RepID=I0L6M1_9ACTO
PLM1_60_b1_redo_sep16_scaffold_1241_8
Mycobacterium llatzerense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8644..9843)
DNA (1200bp) protein (400aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MWG4_9ACTO
Mycobacterium llatzerense strain CLUC14 Mllat_contig000025, whole genome shotgun sequence {ECO:0000313|EMBL:KIU15630.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium llatzerense.;"
ECF subfamily RNA polymerase sigma-24 subunit
PLM1_60_b1_redo_sep16_scaffold_1241_9
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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10106..11494
DNA (1389bp) protein (463aa)
Cytochrome bd ubiquinol oxidase subunit I Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y634_THEBD
cytochrome bd ubiquinol oxidase subunit I
Cytochrome bd ubiquinol oxidase subunit I {ECO:0000313|EMBL:ADG89450.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_60_b1_redo_sep16_scaffold_1241_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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11504..12499
DNA (996bp) protein (332aa)
Cytochrome d oxidase cyd, subunit II {ECO:0000313|EMBL:EXG79734.1}; EC=1.10.3.10 {ECO:0000313|EMBL:EXG79734.1};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Cytochrome C oxidase assembly protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2PN17_9ACTO
cytochrome d ubiquinol oxidase subunit II
PLM1_60_b1_redo_sep16_scaffold_1241_11
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12496..14133
DNA (1638bp) protein (546aa)
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y632_THEBD
cysteine ABC transporter permease/ATP-binding protein CydD
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD {ECO:0000313|EMBL:ADG89448.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_60_b1_redo_sep16_scaffold_1241_12
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

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14130..15869
DNA (1740bp) protein (580aa)
ABC transporter ATP-binding protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2MPV2_9ACTO
cysteine ABC transporter permease/ATP-binding protein CydC
ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC {ECO:0000313|EMBL:ADG89447.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_60_b1_redo_sep16_scaffold_1241_13
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16027..16455
DNA (429bp) protein (143aa)
hypothetical protein Tax=Saccharopolyspora spinosa RepID=UPI000237A707
hypothetical protein
CBS domain protein {ECO:0000313|EMBL:CAM02762.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM1_60_b1_redo_sep16_scaffold_1241_14
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(16605..18239)
DNA (1635bp) protein (545aa)
Subtilisin-like serine protease Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TGC6_AMYOR
subtilisin-like serine protease
Subtilisin-like serine protease {ECO:0000313|EMBL:AGM09348.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
Displaying 14 items

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