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PLM1_60_b1_redo_sep16_scaffold_1500

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1500_1
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(3..245)
DNA (243bp) protein (81aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium hassiacum DSM 44199.;"
phosphoketolase (EC:4.1.2.9)
Probable phosphoketolase Tax=Mycobacterium hassiacum RepID=K5B8F9_9MYCO
PLM1_60_b1_redo_sep16_scaffold_1500_2
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(242..619)
DNA (378bp) protein (126aa)
Uncharacterized protein Tax=Amycolatopsis orientalis HCCB10007 RepID=R4T453_AMYOR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGM07206.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
PLM1_60_b1_redo_sep16_scaffold_1500_3
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(634..1620)
DNA (987bp) protein (329aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S9A7_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB75707.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_1500_4
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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1858..2289
DNA (432bp) protein (144aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003638151
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ87155.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_1500_5
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2374..4137
DNA (1764bp) protein (588aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI0003612290
TWO COMPONENT SENSOR HISTIDINE KINASE DEVS {ECO:0000313|EMBL:CEL13280.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
ATPase domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_1500_6
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4151..6820)
DNA (2670bp) protein (890aa)
acyl-CoA synthetase Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002627D0D
acyl-CoA synthetase (NDP forming type)
Acyl-CoA synthetase (NDP forming type) {ECO:0000313|EMBL:AHH96934.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_1500_7
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6817..7857)
DNA (1041bp) protein (347aa)
alcohol dehydrogenase Tax=Streptomyces sp. BoleA5 RepID=UPI000371D4FA
Alcohol dehydrogenase {ECO:0000313|EMBL:KDS85597.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
zinc-containing dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_1500_8
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7952..8920)
DNA (969bp) protein (323aa)
Magnesium and cobalt transporter CorA Tax=Streptomyces sp. AA4 RepID=D9UZX7_9ACTO
Magnesium and cobalt transporter CorA {ECO:0000313|EMBL:EFL08902.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
corA; magnesium and cobalt transporter CorA
PLM1_60_b1_redo_sep16_scaffold_1500_9
unknown

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9097..9594
DNA (498bp) protein (166aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1500_10
Streptomyces sp. e14, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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9606..10520
DNA (915bp) protein (305aa)
hypothetical protein Tax=Longispora albida RepID=UPI00036B574F
Universal stress protein {ECO:0000313|EMBL:EFF89654.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. e14.;"
UspA domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_1500_11
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10525..10731)
DNA (207bp) protein (69aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00035EE3DC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ87653.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_1500_12
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10863..12248)
DNA (1386bp) protein (462aa)
Beta-lactamase domain protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SFD7_NOCSJ
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ABL80522.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM1_60_b1_redo_sep16_scaffold_1500_13
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12539..13669
DNA (1131bp) protein (377aa)
Uncharacterized protein Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3A7M4_STRMB
Uncharacterized protein {ECO:0000313|EMBL:EMF01154.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1500_14
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13780..14313)
DNA (534bp) protein (178aa)
hypothetical protein Tax=Longispora albida RepID=UPI00037B41E8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL90853.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_1500_15

Not on your lists

comp(14471..15031)
DNA (561bp) protein (187aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI0003653EC7
Uncharacterized protein {ECO:0000313|EMBL:AIA11323.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
putative DNA-binding protein
PLM1_60_b1_redo_sep16_scaffold_1500_16
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15350..15880)
DNA (531bp) protein (177aa)
hypothetical protein Tax=Streptomyces sp. CNS615 RepID=UPI000362073A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIS02523.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
PLM1_60_b1_redo_sep16_scaffold_1500_17
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15861..16241)
DNA (381bp) protein (127aa)
hypothetical protein Tax=Streptomyces somaliensis RepID=UPI00029B2D49
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFF98224.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
PLM1_60_b1_redo_sep16_scaffold_1500_18
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16520..16738
DNA (219bp) protein (73aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B4C971
Uncharacterized protein {ECO:0000313|EMBL:EXG79408.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1500_19
unknown

Not on your lists

comp(16774..17121)
DNA (348bp) protein (116aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1500_20
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17313..17462)
DNA (150bp) protein (50aa)
ABC transporter permease Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VTL8_9ACTO
ABC transporter permease
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
Displaying 20 items

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