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PLM1_60_b1_redo_sep16_scaffold_1578

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1578_1
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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393..1619
DNA (1227bp) protein (409aa)
Transposase IS111A/IS1328/IS1533 Tax=Frankia sp. EUN1f RepID=D3CSY8_9ACTO
Transposase IS111A/IS1328/IS1533 {ECO:0000313|EMBL:EFC86218.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1578_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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2099..2488
DNA (390bp) protein (130aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI0003780EFB
Uncharacterized protein {ECO:0000313|EMBL:EXG79459.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_60_b1_redo_sep16_scaffold_1578_3
Streptomyces fulvissimus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2560..3093)
DNA (534bp) protein (178aa)
Resuscitation-promoting factor RpfA Tax=Streptomyces fulvissimus DSM 40593 RepID=N0CVS3_9ACTO
Resuscitation-promoting factor RpfA
Uncharacterized protein {ECO:0000313|EMBL:AGK77117.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fulvissimus DSM 40593.;"
PLM1_60_b1_redo_sep16_scaffold_1578_4
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3286..3978)
DNA (693bp) protein (231aa)
hypothetical protein Tax=Actinopolyspora halophila RepID=UPI0003802F25
Uncharacterized protein {ECO:0000313|EMBL:KIF75369.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
L-lactate transport
PLM1_60_b1_redo_sep16_scaffold_1578_5
unknown

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4005..4217
DNA (213bp) protein (71aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1578_6
unknown

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4365..4676
DNA (312bp) protein (104aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1578_7
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5151..5972
DNA (822bp) protein (274aa)
5-keto-4-deoxyuronate isomerase (EC:5.3.1.17)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; DKI isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BY11_BEUC1
PLM1_60_b1_redo_sep16_scaffold_1578_8
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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6031..6858
DNA (828bp) protein (276aa)
hypothetical protein Tax=Actinopolyspora halophila RepID=UPI00037BDF5C
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB31467.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM1_60_b1_redo_sep16_scaffold_1578_9
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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6855..7640
DNA (786bp) protein (262aa)
hypothetical protein Tax=Nocardia sp. BMG111209 RepID=UPI00036C0663
Uncharacterized protein {ECO:0000313|EMBL:KJK49970.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
IclR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1578_10
Streptomyces bottropensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7926..10997
DNA (3072bp) protein (1024aa)
hypothetical protein Tax=Streptomyces prunicolor RepID=UPI00035E8323
AfsR family transcriptional regulator {ECO:0000313|EMBL:EMF53379.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bottropensis ATCC 25435.;"
AfsR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1578_11
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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10998..11801
DNA (804bp) protein (268aa)
Putative uncharacterized protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AAJ1_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY98904.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_1578_12
Streptomyces toyocaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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11798..12172
DNA (375bp) protein (125aa)
Uncharacterized protein Tax=Streptomyces collinus Tu 365 RepID=S5UMK5_STRCU
Uncharacterized protein {ECO:0000313|EMBL:KES05949.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces toyocaensis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1578_13
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(12217..15963)
DNA (3747bp) protein (1249aa)
hypothetical protein Tax=Amycolatopsis balhimycina RepID=UPI00037BF629
Uncharacterized protein {ECO:0000313|EMBL:KJK33868.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
peptidase S8/S53 subtilisin kexin sedolisin
PLM1_60_b1_redo_sep16_scaffold_1578_14
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(16135..18165)
DNA (2031bp) protein (677aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
Uncharacterized protein Tax=Streptomyces sp. HGB0020 RepID=S2YF59_9ACTO
alpha-galactosidase
PLM1_60_b1_redo_sep16_scaffold_1578_15
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18488..18781)
DNA (294bp) protein (98aa)
hypothetical protein Tax=Streptomyces rapamycinicus RepID=UPI000382FCE2
Uncharacterized protein {ECO:0000313|EMBL:KJK53030.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
Displaying 15 items

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