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PLM1_60_b1_redo_sep16_scaffold_1872

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1872_1
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1..105
DNA (105bp) protein (35aa)
Putative LysR-family transcriptional regulator Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82AT2_STRAW
LysR family transcriptional regulator
Putative LysR-family transcriptional regulator {ECO:0000313|EMBL:BAC73686.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
PLM1_60_b1_redo_sep16_scaffold_1872_2
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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143..976
DNA (834bp) protein (278aa)
Glycoside hydrolase family 16 Tax=Micromonospora sp. ATCC 39149 RepID=C4RNM4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGM02239.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
O-Glycosyl hydrolase
PLM1_60_b1_redo_sep16_scaffold_1872_3
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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1167..2291
DNA (1125bp) protein (375aa)
Putative transport protein Tax=Rhodococcus sp. EsD8 RepID=N1MFC7_9NOCA
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ETT26988.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
major facilitator superfamily protein
PLM1_60_b1_redo_sep16_scaffold_1872_4
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2260..2934)
DNA (675bp) protein (225aa)
Uncharacterized protein Tax=Cystobacter fuscus DSM 2262 RepID=S9PJT0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX63326.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1872_5
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3036..3347)
DNA (312bp) protein (104aa)
hypothetical protein Tax=Pseudonocardia sp. P1 RepID=UPI0001FFF267
Putative integration host factor {ECO:0000313|EMBL:EWC59038.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1872_6
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3577..4812
DNA (1236bp) protein (412aa)
Major facilitator superfamily MFS_1 Tax=Frankia sp. EUN1f RepID=D3CVY9_9ACTO
Transporter, putative {ECO:0000313|EMBL:CEL15465.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
major facilitator family transporter
PLM1_60_b1_redo_sep16_scaffold_1872_7
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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4852..5493
DNA (642bp) protein (214aa)
alkylated DNA repair protein Tax=Amycolatopsis nigrescens RepID=UPI000381A578
Uncharacterized protein {ECO:0000313|EMBL:GAJ85548.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis NBRC 14402.;"
alkylated DNA repair protein
PLM1_60_b1_redo_sep16_scaffold_1872_8
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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5672..10918
DNA (5247bp) protein (1749aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI000366F8FC
Serine/threonine protein kinase {ECO:0000313|EMBL:AGL19765.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
serine/threonine protein kinase
PLM1_60_b1_redo_sep16_scaffold_1872_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(10926..11945)
DNA (1020bp) protein (340aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein Tax=Longispora albida RepID=UPI00037653D0
ATP-binding region ATPase domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_1872_10
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(11945..12637)
DNA (693bp) protein (231aa)
PhoB family transcriptional regulator Tax=Actinoplanes globisporus RepID=UPI00037CEB1B
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EXG81563.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
response regulator receiver protein
PLM1_60_b1_redo_sep16_scaffold_1872_11
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12739..14019)
DNA (1281bp) protein (427aa)
Cytochrome c551/c552 Tax=Cystobacter fuscus DSM 2262 RepID=S9PHA0_9DELT
Cytochrome c551/c552 {ECO:0000313|EMBL:EPX61797.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
40-residue YVTN beta-propeller repeat-containing protein
PLM1_60_b1_redo_sep16_scaffold_1872_12
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(14016..15416)
DNA (1401bp) protein (467aa)
Glycoside hydrolase family 18 Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9T361_MICAI
Glycoside hydrolase family 18 {ECO:0000313|EMBL:ADL45589.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
chiA4; chitinase
Displaying 12 items

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