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PLM1_60_b1_redo_sep16_scaffold_1938

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1938_1
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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295..873
DNA (579bp) protein (193aa)
Uncharacterized protein Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TBK6_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:EWM15231.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
sigma-70 family RNA polymerase sigma factor
PLM1_60_b1_redo_sep16_scaffold_1938_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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1277..2827
DNA (1551bp) protein (517aa)
Probable DNA ligase Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y4G5_THEBD
ATP-dependent DNA ligase I
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_60_b1_redo_sep16_scaffold_1938_3
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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2961..3386
DNA (426bp) protein (142aa)
Uncharacterized protein Tax=Pseudomonas sp. GM67 RepID=J2UM10_9PSED
Dehydrogenase {ECO:0000313|EMBL:KIO48215.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_1938_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3565..4755
DNA (1191bp) protein (397aa)
RNA polymerase sigma-70 factor, ECF subfamily Tax=Sorangium cellulosum (strain So ce56) RepID=A9GKH1_SORC5
ECF subfamily RNA polymerase sigma factor
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:CAN96584.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PLM1_60_b1_redo_sep16_scaffold_1938_5
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(4758..5171)
DNA (414bp) protein (138aa)
MerR family transcriptional regulator Tax=Actinopolymorpha alba RepID=UPI00036384C6
MerR-family transcriptional regulator {ECO:0000313|EMBL:EDY64744.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
MerR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1938_6
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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5251..6300
DNA (1050bp) protein (350aa)
aldo/keto reductase Tax=Actinopolymorpha alba RepID=UPI0003659F8F
putative aldo/keto reductase
Putative aldo/keto reductase {ECO:0000313|EMBL:ADI12476.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM1_60_b1_redo_sep16_scaffold_1938_7
Streptomyces lydicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(6310..6459)
DNA (150bp) protein (50aa)
Uncharacterized protein Tax=Streptomyces aurantiacus JA 4570 RepID=S3ZIZ1_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJT63120.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lydicus A02.;"
PLM1_60_b1_redo_sep16_scaffold_1938_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(6748..7584)
DNA (837bp) protein (279aa)
Alpha/beta hydrolase fold protein Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD66_CONWI
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADB53458.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_60_b1_redo_sep16_scaffold_1938_9
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7587..8765)
DNA (1179bp) protein (393aa)
Putative uncharacterized protein Tax=Frankia sp. (strain EAN1pec) RepID=A8L721_FRASN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW13512.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_60_b1_redo_sep16_scaffold_1938_10
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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9022..10488
DNA (1467bp) protein (489aa)
transposase Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDE6A
Transposase {ECO:0000313|EMBL:KKC04333.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
transposase Tn3
PLM1_60_b1_redo_sep16_scaffold_1938_11
Frankia sp. CcI3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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10535..11968
DNA (1434bp) protein (478aa)
Transposase Tn3 Tax=Frankia sp. (strain CcI3) RepID=Q2JAF8_FRASC
transposase Tn3
Transposase Tn3 {ECO:0000313|EMBL:ABD11734.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;"
PLM1_60_b1_redo_sep16_scaffold_1938_12
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12180..12521)
DNA (342bp) protein (114aa)
Phenazine biosynthesis PhzC/PhzF protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2ING4_ANADE
phenazine biosynthesis PhzC/PhzF protein
Phenazine biosynthesis PhzC/PhzF protein {ECO:0000313|EMBL:ABC80349.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
PLM1_60_b1_redo_sep16_scaffold_1938_13
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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12583..13185
DNA (603bp) protein (201aa)
XRE family transcriptional regulator Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI00035D67C9
XRE family transcriptional regulator {ECO:0000313|EMBL:EWT01554.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
helix-turn-helix domain protein
PLM1_60_b1_redo_sep16_scaffold_1938_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

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13178..13897
DNA (720bp) protein (240aa)
B3/4 domain protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2A8_SPHTD
B3/4 domain-containing protein
B3/4 domain protein {ECO:0000313|EMBL:ACZ38375.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM1_60_b1_redo_sep16_scaffold_1938_15
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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13910..14152
DNA (243bp) protein (81aa)
Putative permease, DMT superfamily Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0M6A2_ARTPP
drug/metabolite transporter permease
Putative permease, DMT superfamily {ECO:0000313|EMBL:ADX71373.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
PLM1_60_b1_redo_sep16_scaffold_1938_16
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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14149..15042
DNA (894bp) protein (298aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S7E0_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB73440.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
Displaying 16 items

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