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PLM1_60_b1_redo_sep16_scaffold_2274

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_2274_1

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258..731
DNA (474bp) protein (158aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR10392.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_39_18.;"
PLM1_60_b1_redo_sep16_scaffold_2274_2
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1029..1676
DNA (648bp) protein (216aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00037CD7C3
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJK44648.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
LuxR family two component transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_2274_3
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1679..2602)
DNA (924bp) protein (308aa)
Type II secretion system protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ACT4_THECD
Uncharacterized protein {ECO:0000313|EMBL:KJK44649.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
type II secretion system protein
PLM1_60_b1_redo_sep16_scaffold_2274_4
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2605..4551)
DNA (1947bp) protein (649aa)
Type II secretion system protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ACT5_THECD
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:ACY97424.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_2274_5
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4548..5909)
DNA (1362bp) protein (454aa)
Type II secretion system protein E Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6S8T1_INTC7
Uncharacterized protein {ECO:0000313|EMBL:KJK44650.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
type II secretion system protein E
PLM1_60_b1_redo_sep16_scaffold_2274_6
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5906..7087)
DNA (1182bp) protein (394aa)
AAA ATPase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VS29_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KJK44651.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
AAA ATPase
PLM1_60_b1_redo_sep16_scaffold_2274_7
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(7108..7929)
DNA (822bp) protein (274aa)
Flp pilus assembly protein CpaB Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VVB9_9ACTO
Flp pilus assembly protein CpaB
Flp pilus assembly protein CpaB {ECO:0000313|EMBL:AGZ39650.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_2274_8
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7955..9085)
DNA (1131bp) protein (377aa)
Uncharacterized protein Tax=Janibacter sp. HTCC2649 RepID=A3TQW3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJK44653.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_2274_9
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(9073..9471)
DNA (399bp) protein (133aa)
TadE family protein Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1UXV2_9MICC
Uncharacterized protein {ECO:0000313|EMBL:KJK44654.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
TadE-like protein
PLM1_60_b1_redo_sep16_scaffold_2274_10
unknown

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comp(9468..9608)
DNA (141bp) protein (47aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2274_11
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(9679..9858)
DNA (180bp) protein (60aa)
Pilus subunit protein PilA Tax=Blastococcus saxobsidens (strain DD2) RepID=H6RRT7_BLASD
Pilus assembly protein {ECO:0000313|EMBL:KHL05039.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
pilA2; Pilus subunit protein PilA
PLM1_60_b1_redo_sep16_scaffold_2274_12
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10181..10900)
DNA (720bp) protein (240aa)
peptidase A24 Tax=Salinispora pacifica RepID=UPI000370A9A0
Peptidase A24 {ECO:0000313|EMBL:KKA41787.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
pppA; prepilin signal peptidase
PLM1_60_b1_redo_sep16_scaffold_2274_13
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(10897..11574)
DNA (678bp) protein (226aa)
Putative two-component system response regulator Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HIP1_ACTM4
putative two-component system response regulator
Transcriptional regulator {ECO:0000313|EMBL:KHD72527.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
PLM1_60_b1_redo_sep16_scaffold_2274_14
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(11571..12770)
DNA (1200bp) protein (400aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Sensor protein Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TLY0_TISMK
pdhS; Sensor protein
PLM1_60_b1_redo_sep16_scaffold_2274_15
unknown

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13206..13535
DNA (330bp) protein (110aa)

This feature has no annotations

Displaying 15 items

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