ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_2417

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_2417_1
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..200
DNA (198bp) protein (66aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI000371C0C0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC56016.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
PLM1_60_b1_redo_sep16_scaffold_2417_2
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

206..865
DNA (660bp) protein (220aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00037624D6
hypothetical protein
ClpA-like ATP-dependent Clp protease {ECO:0000313|EMBL:AEV87485.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_60_b1_redo_sep16_scaffold_2417_3
unknown

Not on your lists

946..1350
DNA (405bp) protein (135aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2417_4
unknown

Not on your lists

1343..1570
DNA (228bp) protein (76aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2417_5
Methylobacterium populi, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1558..1704
DNA (147bp) protein (49aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=Methylobacterium sp. MB200 RepID=UPI000346286D
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ACB78209.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001).;"
PLM1_60_b1_redo_sep16_scaffold_2417_6
unknown

Not on your lists

1816..2208
DNA (393bp) protein (131aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2417_7
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3047..3733)
DNA (687bp) protein (229aa)
Integrase catalytic region Tax=Frankia sp. CN3 RepID=G6HF82_9ACTO
integrase catalytic region
Integrase catalytic region {ECO:0000313|EMBL:ADI13138.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM1_60_b1_redo_sep16_scaffold_2417_8
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4458..5585)
DNA (1128bp) protein (376aa)
Uncharacterized protein Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CPB5_SYNLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI02550.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1).;"
PLM1_60_b1_redo_sep16_scaffold_2417_9
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5582..6196)
DNA (615bp) protein (205aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S5R3_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB77319.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_2417_10
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6898..8664)
DNA (1767bp) protein (589aa)
Caspase-related protein Tax=Amycolatopsis orientalis HCCB10007 RepID=R4TE72_AMYOR
Hypothetical protein
Caspase {ECO:0000313|EMBL:KFZ80446.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
PLM1_60_b1_redo_sep16_scaffold_2417_11
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8664..9053)
DNA (390bp) protein (130aa)
Uncharacterized protein Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SZB6_AMYOR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJK58118.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
PLM1_60_b1_redo_sep16_scaffold_2417_12
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9802..10899)
DNA (1098bp) protein (366aa)
hypothetical protein Tax=Streptomyces purpureus RepID=UPI000364C07F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAC68782.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
PLM1_60_b1_redo_sep16_scaffold_2417_13
unknown

Not on your lists

11522..12238
DNA (717bp) protein (239aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2417_14
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12254..12679
DNA (426bp) protein (142aa)
Two-component system regulator Tax=Streptomyces sp. C RepID=D9W1Y7_9ACTO
two-component system regulator
Two-component system regulator {ECO:0000313|EMBL:AIR99607.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
PLM1_60_b1_redo_sep16_scaffold_2417_15
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12948..13397)
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EQD1_AMYSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF40616.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
Displaying 15 items

View Taxonomy