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PLM1_60_b1_redo_sep16_scaffold_2561

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_2561_1
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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1..1506
DNA (1506bp) protein (502aa)
Signaling protein ykoW Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S2E1_ACTS5
Signaling protein ykoW
Signaling protein ykoW {ECO:0000313|EMBL:AEV84817.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_60_b1_redo_sep16_scaffold_2561_2
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1597..1893)
DNA (297bp) protein (99aa)
Uncharacterized protein Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6ES39_AMYSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEF42043.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
PLM1_60_b1_redo_sep16_scaffold_2561_3
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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2027..2266
DNA (240bp) protein (80aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0LBY6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH21333.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_2561_4
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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2419..3441
DNA (1023bp) protein (341aa)
Uncharacterized protein Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2ZEA8_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:KFZ80293.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
Hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_2561_5
unknown

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3502..3666
DNA (165bp) protein (55aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2561_6
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3955..4497)
DNA (543bp) protein (181aa)
membrane protein Tax=Micromonospora sp. CNB394 RepID=UPI000360965C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY96099.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_2561_7
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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4705..7293
DNA (2589bp) protein (863aa)
HAD superfamily ATPase (EC:3.6.3.8)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:ADD43318.1}; EC=3.6.3.8 {ECO:0000313|EMBL:ADD43318.1};; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
hypothetical protein Tax=Longispora albida RepID=UPI00036DC498
PLM1_60_b1_redo_sep16_scaffold_2561_8
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(7285..7941)
DNA (657bp) protein (219aa)
Putative two-component system response regulator Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W3Z8_9ACTO
LuxR family transcriptional regulator {ECO:0000313|EMBL:KHD78663.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
putative two-component system response regulator
PLM1_60_b1_redo_sep16_scaffold_2561_9
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(8065..8700)
DNA (636bp) protein (212aa)
transcriptional regulator Tax=Actinoplanes globisporus RepID=UPI00036009BC
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:AGL16968.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
PLM1_60_b1_redo_sep16_scaffold_2561_10
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8766..9899)
DNA (1134bp) protein (378aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
ackA; acetate kinase A (EC:2.7.2.1)
Acetate kinase Tax=Frankia sp. QA3 RepID=I8QU61_9ACTO
PLM1_60_b1_redo_sep16_scaffold_2561_11
unknown

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comp(9896..10351)
DNA (456bp) protein (152aa)
hypothetical protein Tax=Longispora albida RepID=UPI0003791535
PLM1_60_b1_redo_sep16_scaffold_2561_12
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10512..11528
DNA (1017bp) protein (339aa)
Nitroreductase Tax=Micromonospora sp. (strain L5) RepID=E8RX67_MICSL
nitroreductase
Nitroreductase {ECO:0000313|EMBL:ADL46243.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_2561_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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11525..12439
DNA (915bp) protein (305aa)
UspA domain-containing protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKK9_PSEUX
UspA domain-containing protein
UspA domain-containing protein {ECO:0000313|EMBL:AEA22979.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_60_b1_redo_sep16_scaffold_2561_14
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12456..13430
DNA (975bp) protein (325aa)
hypothetical protein Tax=Longispora albida RepID=UPI00035D3237
Nitroreductase {ECO:0000313|EMBL:CCH16891.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
nitroreductase
PLM1_60_b1_redo_sep16_scaffold_2561_15
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13443..14207)
DNA (765bp) protein (255aa)
ABC transporter related Tax=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) RepID=A4X734_SALTO
ABC transporter-like protein
ABC transporter related {ECO:0000313|EMBL:ABP54684.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_60_b1_redo_sep16_scaffold_2561_16
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(14226..16154)
DNA (1929bp) protein (643aa)
phosphoketolase (EC:4.1.2.9)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Probable phosphoketolase Tax=Actinomadura madurae LIID-AJ290 RepID=U2PE64_9ACTO
PLM1_60_b1_redo_sep16_scaffold_2561_17
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(16129..16482)
DNA (354bp) protein (118aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans SB3094.;"
phosphoketolase Tax=Rhodococcus rhodochrous RepID=UPI000380D018
phosphoketolase
Displaying 17 items

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