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PLM1_60_b1_redo_sep16_scaffold_2070_8

Organism: PLM1_60_b1_sep16_Acidothermus_cellulolyticus_70_16

near complete RP 52 / 55 BSCG 50 / 51 MC: 1 ASCG 13 / 38 MC: 3
Location: 8978..10324

Top 3 Functional Annotations

Value Algorithm Source
Integrase protein Tax=Rhodococcus wratislaviensis IFP 2016 RepID=L2TNN2_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 39.6
  • Coverage: 376.0
  • Bit_score: 222
  • Evalue 7.00e-55
Integrase family protein {ECO:0000313|EMBL:ETT28641.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.1
  • Coverage: 377.0
  • Bit_score: 226
  • Evalue 6.80e-56
integrase protein similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 350.0
  • Bit_score: 203
  • Evalue 1.30e-49

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Taxonomy

Rhodococcus rhodochrous → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1347
ATGCCGCAGCCATTGCGGGTGACGGATGAACAGCAGCGTCTGGTCGATGCCTATCTCGCCGACCGGGCCTGGGCCGGTGCGGGCCTGCCCCAGGCAGCGCAGGCCGCCCGGCGGTTTCTGTCGCGCTTCGCCAGCCCTGCCGGCTGGCACACCCTGACGGTGGCCGAGCAGCGGCGACTGCCGGAGACGGTTCGGGCGTTCGTGTGCTGGCCGATGGTGTCCGGGCATCTGCAGGCCACACCGGAGTTCGTCGTGCTCGCCTCGCCGAAGCCCGGCCTGGTCGGCGCCTGGACCCATCCCGAGGTTCGTCAACGGCTGGCCCGGGCCGAGGATCTACTCGGCTACGGCGTGGAGACCCGCCAGTTGGCGTGGTCGGCGCTGATGCGGACGGTGGCGTTGACCGGTGCGGCGCCGCTGCAGGTACGTCGCCGGCATCTGGACCAGGCGCACACCGCGATCGAGACGGCCAGGGAGCGGGTTGCGCCGCGCCGACCTCGGCCACGCAAGGACAACAACGGGGTGAACGTCTCGACCCGGGATGGGTTCCGGCCGTTGGAGATGCTGTTGTTCCATGCCGGCCTCACCGATGAGGCGCCGCGACGGCAACCGGGCAAGAACGCCCAGGTGATCATCGACCGGGAATGGGAGGCGATCGCGGAGCCGATGCGCACCACGATGCGGGACTACCTGGACCAGGTGCGTCTGACCGCCCGCCCGTCCACCGTCAAGAGGGACAGTCGGGCGCTGCGGGATCTGGGCCTGTTCCTGGCCCAGTACGCCCCGGAGGTGACTGCGGTCGCCGGGATCCGCCGCCCGCATATCGAGGCCTACAAGAAGTACCTGACCGGGCGTCGTCATCACCGCTCCCCGAAGGCATCGGGCCTGTCACCGGTCACGGTCGTCAACTACCTGTCCGGGCTGAGTGTCTTCATCCGGCTGACCGAGTGGGGGTCACCCGACACGCCGGCCGGGCCGCTGCTGTTCCGCGGCGACTACCCCGCGGTCGACGACCCGCTGCCGCGGTTCCTCGATGACGCCGCGGCCGCGAAACTCATGAACGCCGCCCGGGCCCACCCCGACCTGCTGACCCGACTCGTCGTCGAACTGCTGGCCCGCACCGGGATGCGCAAGGGCGAACTTGGACGCGGTGGTGCAGATCGGGTCGGCGTACTGGCTGCGGATCCCGGTCGGCAAGCTGCGCAACGACCGGTACGTGCCGCTGCACCCGGACCTGAAGGGCCTCATCGACACCTGGCTGGTCCACCGACACGGCCGGCGCAGCGACCTGCTGCTGATCAAGCGTGGCCGCCCGCTCACCGACGACGTGGTGGACCGGATGCTGCGTGA
PROTEIN sequence
Length: 449
MPQPLRVTDEQQRLVDAYLADRAWAGAGLPQAAQAARRFLSRFASPAGWHTLTVAEQRRLPETVRAFVCWPMVSGHLQATPEFVVLASPKPGLVGAWTHPEVRQRLARAEDLLGYGVETRQLAWSALMRTVALTGAAPLQVRRRHLDQAHTAIETARERVAPRRPRPRKDNNGVNVSTRDGFRPLEMLLFHAGLTDEAPRRQPGKNAQVIIDREWEAIAEPMRTTMRDYLDQVRLTARPSTVKRDSRALRDLGLFLAQYAPEVTAVAGIRRPHIEAYKKYLTGRRHHRSPKASGLSPVTVVNYLSGLSVFIRLTEWGSPDTPAGPLLFRGDYPAVDDPLPRFLDDAAAAKLMNAARAHPDLLTRLVVELLARTGMRKGELGRGGADRVGVLAADPGRQAAQRPVRAAAPGPEGPHRHLAGPPTRPAQRPAADQAWPPAHRRRGGPDAA*