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PLM1_60_b1_redo_sep16_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 204 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_3_1
Arthrobacter sp. Rue61a, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..181)
DNA (180bp) protein (60aa)
pknB; serine/threonine-protein kinase PknB (EC:2.7.11.1)
Putative serine/threonine-protein kinase PknB {ECO:0000313|EMBL:AFR26973.1}; EC=2.7.11.1 {ECO:0000313|EMBL:AFR26973.1};; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. Rue61a.;"
serine/threonine protein kinase Tax=Arthrobacter sp. M2012083 RepID=UPI00036D9BFC
PLM1_60_b1_redo_sep16_scaffold_3_2
unknown

Not on your lists

comp(301..930)
DNA (630bp) protein (210aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_3_3
Thaumarchaeota archaeon N4, Thaumarchaeota, Archaea

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1139..1747
DNA (609bp) protein (203aa)
Protease inhibitor Kazal-type Tax=Thaumarchaeota archaeon N4 RepID=V6ATH1_9ARCH
Protease inhibitor Kazal-type {ECO:0000313|EMBL:CDI05879.1}; species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota.;" source="Thaumarchaeota archaeon N4.;"
blue (type 1) copper domain protein
PLM1_60_b1_redo_sep16_scaffold_3_4
unknown

Not on your lists

comp(1971..2147)
DNA (177bp) protein (59aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_3_5
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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2281..4689
DNA (2409bp) protein (803aa)
3-hydroxyacyl-CoA dehydrogenase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUC6_RUBXD
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain {ECO:0000313|EMBL:AHY47122.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM1_60_b1_redo_sep16_scaffold_3_6
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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4917..6101
DNA (1185bp) protein (395aa)
3-ketoacyl-CoA thiolase Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUC7_RUBXD
AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase
AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:AHY47121.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter radiotolerans.;"
PLM1_60_b1_redo_sep16_scaffold_3_7
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6333..6548
DNA (216bp) protein (72aa)
hypothetical protein Tax=Streptomyces sp. LaPpAH-108 RepID=UPI000368522D
Uncharacterized protein {ECO:0000313|EMBL:EST23519.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_3_8
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

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comp(6774..8030)
DNA (1257bp) protein (419aa)
Uncharacterized protein Tax=Bacteroidales RepID=I8WWL2_BACFG
hypothetical protein
Tax=BJP_IG2102_Elusimicrobia_52_42
PLM1_60_b1_redo_sep16_scaffold_3_9
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8100..9764)
DNA (1665bp) protein (555aa)
Malto-oligosyltrehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Short=MTHase {ECO:0000256|PIRNR:PIRNR006337};; EC=3.2.1.141 {ECO:0000256|PIRNR:PIRNR006337};; 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; Maltooligosyl trehalose trehalohydrolase {ECO:0000256|PIRNR:PIRNR006337}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio thiocyanoxidans ARh 4.;"
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI000380CF03
malto-oligosyltrehalose trehalohydrolase
PLM1_60_b1_redo_sep16_scaffold_3_10
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(9920..12271)
DNA (2352bp) protein (784aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI00037A7B53
glgB; 1,4-alpha-glucan branching enzyme
PLM1_60_b1_redo_sep16_scaffold_3_11
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(12276..13784)
DNA (1509bp) protein (503aa)
Putative uncharacterized protein Tax=Streptomyces clavuligerus RepID=E2Q6X2_STRC2
Maltokinase {ECO:0000313|EMBL:KKA42946.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
aminoglycoside phosphotransferase
PLM1_60_b1_redo_sep16_scaffold_3_12
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13791..15755)
DNA (1965bp) protein (655aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B565_FRADG
alpha amylase
PLM1_60_b1_redo_sep16_scaffold_3_13
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15931..18474
DNA (2544bp) protein (848aa)
alpha-glucan phosphorylase (EC:2.4.1.1)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Phosphorylase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1ABU4_THECD
PLM1_60_b1_redo_sep16_scaffold_3_14
Meiothermus ruber, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(18654..19061)
DNA (408bp) protein (136aa)
UPI000349A4BF related cluster Tax=unknown RepID=UPI000349A4BF
N-acetyltransferase GCN5
N-acetyltransferase GCN5 {ECO:0000313|EMBL:AGK03714.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21); (Thermus ruber).;"
PLM1_60_b1_redo_sep16_scaffold_3_15
Oceanobacillus oncorhynchi, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19276..19941)
DNA (666bp) protein (222aa)
ClpX-like protein Tax=Paenibacillus larvae RepID=UPI00016955B1
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source="Oceanobacillus oncorhynchi.;"
clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
PLM1_60_b1_redo_sep16_scaffold_3_16
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(20278..22668)
DNA (2391bp) protein (797aa)
Malto-oligosyltrehalose synthase {ECO:0000313|EMBL:EWC59733.1}; EC=5.4.99.15 {ECO:0000313|EMBL:EWC59733.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Malto-oligosyltrehalose synthase Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9TA71_MICAI
malto-oligosyltrehalose synthase
PLM1_60_b1_redo_sep16_scaffold_3_17
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(22716..23291)
DNA (576bp) protein (192aa)
hypothetical protein Tax=Streptomyces RepID=UPI00036FCAFC
Uncharacterized protein {ECO:0000313|EMBL:ETK37847.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
TetR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_3_18
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23348..23671)
DNA (324bp) protein (108aa)
ligand-binding protein SH3 Tax=Streptomyces sp. AA1529 RepID=UPI0002E23CFF
Putative uncharacterized protein {ECO:0000313|EMBL:EDX24017.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
small multidrug resistance protein
PLM1_60_b1_redo_sep16_scaffold_3_19
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23728..25863)
DNA (2136bp) protein (712aa)
glgX; glycogen operon protein GlgX (EC:3.2.1.-)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
Glycogen operon protein GlgX Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SHW3_ACTS5
PLM1_60_b1_redo_sep16_scaffold_3_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

25951..28149
DNA (2199bp) protein (733aa)
4-alpha-glucanotransferase bin=GWC2_Methylomirabilis_70_24 species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
4-alpha-glucanotransferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_b1_redo_sep16_scaffold_3_21
Leptospira broomii, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(28117..28839)
DNA (723bp) protein (241aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI000373EE1E
Putative membrane protein {ECO:0000313|EMBL:EQA45544.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira broomii serovar Hurstbridge str. 5399.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_3_22
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

28931..29515
DNA (585bp) protein (195aa)
Transcriptional regulator, TetR family Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C414_SPHTD
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACZ38981.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM1_60_b1_redo_sep16_scaffold_3_23
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(29678..30484)
DNA (807bp) protein (269aa)
Uncharacterized protein Tax=Crinalium epipsammum PCC 9333 RepID=K9VVG2_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ11160.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
PLM1_60_b1_redo_sep16_scaffold_3_24
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30477..30974)
DNA (498bp) protein (166aa)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI00037D3498
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACU76540.1}; species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
PLM1_60_b1_redo_sep16_scaffold_3_25
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31311..32366)
DNA (1056bp) protein (352aa)
ABC-type di-/oligopeptide transporter, ATPase subunit Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0JS11_SACES
appF; ABC-type di-/oligopeptide transporter, ATPase subunit
ABC-type di-/oligopeptide transporter, ATPase subunit {ECO:0000313|EMBL:CCH27579.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
PLM1_60_b1_redo_sep16_scaffold_3_26
Amycolatopsis decaplanina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32497..33585)
DNA (1089bp) protein (363aa)
peptide ABC transporter ATPase Tax=Sciscionella marina RepID=UPI000364481C
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:EME51379.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis decaplanina DSM 44594.;"
dppD; Dipeptide transport ATP-binding protein
PLM1_60_b1_redo_sep16_scaffold_3_27
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33582..34490)
DNA (909bp) protein (303aa)
ABC transporter permease Tax=Micromonospora sp. CNB394 RepID=UPI00036CB291
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADB73264.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_3_28
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34547..35551)
DNA (1005bp) protein (335aa)
Binding-protein-dependent transport systems inner membrane component Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S646_GEOOG
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADB73263.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_3_29
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35615..37249)
DNA (1635bp) protein (545aa)
Extracellular solute-binding protein family 5 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S645_GEOOG
family 5 extracellular solute-binding protein
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ADB73262.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_3_30
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37404..37970)
DNA (567bp) protein (189aa)
Putative metal-sulfur cluster biosynthetic enzyme Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PQ28_9FIRM
Putative metal-sulfur cluster biosynthetic enzyme {ECO:0000313|EMBL:EKP95012.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
phenylacetate-CoA oxygenase, PaaJ subunit
Displaying items 1-30 of 204 in total

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