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PLM1_60_b1_redo_sep16_scaffold_10

Search features with annotation key words

Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_10_1
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(456..1388)
DNA (933bp) protein (311aa)
hypothetical protein Tax=Streptomyces sp. BoleA5 RepID=UPI00036AC2C9
Uncharacterized protein {ECO:0000313|EMBL:KKD03435.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
PadR-family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_10_2
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1489..4221
DNA (2733bp) protein (911aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0KXT6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KKD03451.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_10_3
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4225..4971
DNA (747bp) protein (249aa)
ABC transporter, ATP-binding protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0KXT5_9ACTO
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CCH16382.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
ABC transporter-like protein
PLM1_60_b1_redo_sep16_scaffold_10_4
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

5109..7019
DNA (1911bp) protein (637aa)
Zinc finger SWIM domain protein Tax=Pedosphaera parvula Ellin514 RepID=B9XDN9_9BACT
Zinc finger SWIM domain protein {ECO:0000313|EMBL:EEF62185.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
zinc finger SWIM domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_10_5
Geitlerinema sp. PCC 7407, Geitlerinema, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

7755..8723
DNA (969bp) protein (323aa)
ATPase associated with various cellular activities AAA_5 Tax=Geitlerinema sp. PCC 7407 RepID=K9S7P1_9CYAN
ATPase
ATPase associated with various cellular activities AAA_5 {ECO:0000313|EMBL:AFY65986.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Geitlerinema.;" source="Geitlerinema sp. PCC 7407.;"
PLM1_60_b1_redo_sep16_scaffold_10_6
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

8809..10932
DNA (2124bp) protein (708aa)
Putative uncharacterized protein Tax=Oscillochloris trichoides DG-6 RepID=E1IDA7_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFO80784.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscillochloridaceae; Oscillochloris.;" source="Oscillochloris trichoides DG-6.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_10_7
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10929..12080
DNA (1152bp) protein (384aa)
VWA containing CoxE family protein Tax=Oscillochloris trichoides DG-6 RepID=E1IDB0_9CHLR
VWA containing CoxE family protein {ECO:0000313|EMBL:EEF62181.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_10_8
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12204..13286
DNA (1083bp) protein (361aa)
hypothetical protein Tax=Streptomyces sp. CNS335 RepID=UPI00037FED39
endonuclease/exonuclease/phosphatase
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:ABW13338.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_60_b1_redo_sep16_scaffold_10_9
Brevibacillus sp. BC25, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13439..14548)
DNA (1110bp) protein (370aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037D234D
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EJL24559.1}; Flags: Precursor;; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. BC25.;"
glycerophosphoryl diester phosphodiesterase
PLM1_60_b1_redo_sep16_scaffold_10_10
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14953..16071
DNA (1119bp) protein (373aa)
Low temperature requirement A Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A8F9_THECD
Membrane protein {ECO:0000313|EMBL:ETK32075.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
low temperature requirement A
PLM1_60_b1_redo_sep16_scaffold_10_11

Not on your lists

16526..16840
DNA (315bp) protein (105aa)
DNA integration/recombination/inversion protein Tax=mine drainage metagenome RepID=T1AWG5_9ZZZZ
DNA integration/recombination/inversion protein {ECO:0000313|EMBL:EQD46430.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
Phage integrase family
PLM1_60_b1_redo_sep16_scaffold_10_trna_1
unknown

Not on your lists

16831..16904
DNA (74bp)
transferRNA Met
PLM1_60_b1_redo_sep16_scaffold_10_12
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16991..18130
DNA (1140bp) protein (380aa)
hypothetical protein Tax=Salinispora arenicola RepID=UPI000380A95E
Micromonospora carbonacea strain JXNU-1 contig2, whole genome shotgun sequence {ECO:0000313|EMBL:KIR63361.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
integrase family protein
PLM1_60_b1_redo_sep16_scaffold_10_13
Thermus filiformis, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

18418..18771
DNA (354bp) protein (118aa)
hypothetical protein Tax=Thioalkalivibrio RepID=UPI00036FB29D
Peptide methionine sulfoxide reductase {ECO:0000313|EMBL:KGQ21517.2}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus filiformis.;"
peptide methionine sulfoxide reductase
PLM1_60_b1_redo_sep16_scaffold_10_14
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19311..19760
DNA (450bp) protein (150aa)
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI00037ED878
Transposase, IS4 family {ECO:0000313|EMBL:KJE21081.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
transposase, IS4
PLM1_60_b1_redo_sep16_scaffold_10_15
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(20497..21834)
DNA (1338bp) protein (446aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3IKY3_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB62378.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_10_16
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(21849..23453)
DNA (1605bp) protein (535aa)
Putative peptidase Tax=planctomycete KSU-1 RepID=I3IKY2_9PLAN
Putative peptidase {ECO:0000313|EMBL:GAB62377.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
peptidase S8/S53 subtilisin kexin sedolisin
PLM1_60_b1_redo_sep16_scaffold_10_17
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23913..26696)
DNA (2784bp) protein (928aa)
WD40 repeat-domain-containing protein-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B3F9_STRRD
hypothetical protein
WD40 repeat-domain-containing protein-like protein {ECO:0000313|EMBL:ACZ87475.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_10_18
unknown

Not on your lists

comp(27369..27893)
DNA (525bp) protein (175aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_10_19
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28655..30001
DNA (1347bp) protein (449aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H9H7_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL89664.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_10_20
Acinetobacter venetianus, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29827..30300)
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Synechocystis sp. PCC 7509 RepID=L8KR22_9SYNC
Uncharacterized protein {ECO:0000313|EMBL:ENV38676.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. (strain ATCC 31012).;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_10_21
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30448..31071)
DNA (624bp) protein (208aa)
hypothetical protein Tax=Nocardiopsis chromatogenes RepID=UPI0003489154
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ADB76551.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_10_22
unknown

Not on your lists

comp(31233..31670)
DNA (438bp) protein (146aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_10_23
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(31688..32203)
DNA (516bp) protein (172aa)
Uncharacterized protein Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YVZ5_NOCFA
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_60_b1_redo_sep16_scaffold_10_24
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32302..33675)
DNA (1374bp) protein (458aa)
FAD-dependent pyridine nucleotide-disulphide oxidoreductase Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XA35_NAKMY
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ACV81235.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM1_60_b1_redo_sep16_scaffold_10_25
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34321..34764)
DNA (444bp) protein (148aa)
Uncharacterized protein Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2L034_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDX26427.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
PLM1_60_b1_redo_sep16_scaffold_10_26
Arthrospira sp. PCC 8005, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

34872..36179
DNA (1308bp) protein (436aa)
Putative bifunctional two-component response regulator, CheY-like/Guanylate cyclase {ECO:0000313|EMBL:CCE17438.1}; EC=4.6.1.2 {ECO:0000313|EMBL:CCE17438.1};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira sp. PCC 8005.;"
Putative bifunctional two-component response regulator, CheY-like/Guanylate cyclase Tax=Arthrospira sp. PCC 8005 RepID=H1WD06_9CYAN
adenylate cyclase
PLM1_60_b1_redo_sep16_scaffold_10_27
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36491..36904
DNA (414bp) protein (138aa)
Putative uncharacterized protein Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5HJE1_STRPR
Putative uncharacterized protein {ECO:0000313|EMBL:EDY66952.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pristinaespiralis ATCC 25486.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_10_28
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37044..38015)
DNA (972bp) protein (324aa)
Magnesium and cobalt transporter CorA Tax=Streptomyces sp. AA4 RepID=D9UZX7_9ACTO
Magnesium and cobalt transporter CorA {ECO:0000313|EMBL:EFL08902.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
corA; magnesium and cobalt transporter CorA
PLM1_60_b1_redo_sep16_scaffold_10_29
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38178..38351)
DNA (174bp) protein (58aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI00034C06B2
ATPase-like protein
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:CCH28460.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 /; NBRC 15066 / NRRL 15764).;"
Displaying items 1-30 of 132 in total

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