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PLM1_60_b1_redo_sep16_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_30_1
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(225..725)
DNA (501bp) protein (167aa)
Transposase Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7C9L3_STRBB
transposase
Transposase {ECO:0000313|EMBL:ADI12725.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
PLM1_60_b1_redo_sep16_scaffold_30_2
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(837..2024)
DNA (1188bp) protein (396aa)
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6Q3S7_9FIRM
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:EKP95754.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter subterraneus DSM 13965.;"
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase
PLM1_60_b1_redo_sep16_scaffold_30_3
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

2207..2635
DNA (429bp) protein (143aa)
CoA-binding domain protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C5K7_SPHTD
CoA-binding domain-containing protein
CoA-binding domain protein {ECO:0000313|EMBL:ACZ37523.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM1_60_b1_redo_sep16_scaffold_30_4
Frigoribacterium sp. MEB024, Frigoribacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2714..3574)
DNA (861bp) protein (287aa)
Dihydropteroate synthase {ECO:0000256|RuleBase:RU361205}; Short=DHPS {ECO:0000256|RuleBase:RU361205};; EC=2.5.1.15 {ECO:0000256|RuleBase:RU361205};; Dihydropteroate pyrophosphorylase {ECO:0000256|RuleBase:RU361205}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium sp. MEB024.;"
dihydropteroate synthase Tax=Curtobacterium ginsengisoli RepID=UPI0003B6486E
putative dihydropteroate synthase
PLM1_60_b1_redo_sep16_scaffold_30_5
unknown

Not on your lists

comp(3712..3885)
DNA (174bp) protein (58aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_30_6
Saccharomonospora xinjiangensis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4105..4566
DNA (462bp) protein (154aa)
Polyketide cyclase / dehydrase and lipid transport Tax=Saccharomonospora xinjiangensis XJ-54 RepID=I0V0F6_9PSEU
Polyketide cyclase / dehydrase and lipid transport {ECO:0000313|EMBL:EID53609.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora xinjiangensis XJ-54.;"
Polyketide cyclase / dehydrase and lipid transport
PLM1_60_b1_redo_sep16_scaffold_30_7
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

4604..5119
DNA (516bp) protein (172aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2NB68_9ACTO
Rieske (2Fe-2S) domain protein {ECO:0000313|EMBL:ACB73416.1}; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
Hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_30_8
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5125..5883)
DNA (759bp) protein (253aa)
hypothetical protein Tax=Longispora albida RepID=UPI000379CB94
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL45016.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_30_9
Eremothecium cymbalariae, Eremothecium, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

6073..6894
DNA (822bp) protein (274aa)
Uncharacterized protein Tax=Eremothecium cymbalariae (strain CBS 270.75 / DBVPG 7215 / KCTC 17166 / NRRL Y-17582) RepID=G8JM41_ERECY
Uncharacterized protein {ECO:0000313|EMBL:AET37301.1}; species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium.;" source="Eremothecium cymbalariae (strain CBS 270.75 / DBVPG 7215 / KCTC 17166; / NRRL Y-17582) (Yeast).;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_30_10
Sphingobium chlorophenolicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7094..9589
DNA (2496bp) protein (832aa)
fbiC; FO synthase (EC:2.5.1.-)
FO synthase subunit 1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EYE0_SPHCR
FO synthase subunit 1 {ECO:0000313|EMBL:KEQ52269.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium chlorophenolicum.;"
PLM1_60_b1_redo_sep16_scaffold_30_11
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9693..10331)
DNA (639bp) protein (213aa)
Two-component response regulator Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RQ9_SYMTH
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:BAD39634.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
PLM1_60_b1_redo_sep16_scaffold_30_12
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10345..11901)
DNA (1557bp) protein (519aa)
Aldehyde dehydrogenase bin=GWA2_Ignavibacteria_55_11 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
aldehyde dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM1_60_b1_redo_sep16_scaffold_30_13
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11941..12744)
DNA (804bp) protein (268aa)
Enoyl-CoA hydratase/isomerase Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WKZ3_ACTMD
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ACU34748.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
PLM1_60_b1_redo_sep16_scaffold_30_14
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(12771..13091)
DNA (321bp) protein (107aa)
ethyl tert-butyl ether degradation protein EthD Tax=Bacillus sp. L1(2012) RepID=UPI00034A4F88
ethyl tert-butyl ether degradation EthD
Tax=RBG_16_Chloroflexi_56_8_curated
PLM1_60_b1_redo_sep16_scaffold_30_15
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13091..13504)
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SLA6_THEM7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU51337.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
PLM1_60_b1_redo_sep16_scaffold_30_16
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13545..14963)
DNA (1419bp) protein (473aa)
Uncharacterized protein Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JTK6_STREN
Uncharacterized protein {ECO:0000313|EMBL:KKA41085.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_30_17
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15105..16112)
DNA (1008bp) protein (336aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI0003824CE1
Putative membrane protein {ECO:0000313|EMBL:EGG47624.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_30_18

Not on your lists

16482..19031
DNA (2550bp) protein (850aa)
Aminopeptidase N {ECO:0000313|EMBL:AHE14614.1}; EC=3.4.11.2 {ECO:0000313|EMBL:AHE14614.1};; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
aminopeptidase N Tax=Frankia sp. BMG5.12 RepID=UPI00036EACCD
aminopeptidase N
PLM1_60_b1_redo_sep16_scaffold_30_19
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(19114..19461)
DNA (348bp) protein (116aa)
Uncharacterized protein Tax=Nitrolancetus hollandicus Lb RepID=I4EJA0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84762.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source="Nitrolancea hollandica Lb.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_30_20
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19670..21352
DNA (1683bp) protein (561aa)
Uncharacterized protein Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SQD6_NOCSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL84021.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PLM1_60_b1_redo_sep16_scaffold_30_21
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21511..21783)
DNA (273bp) protein (91aa)
Transcriptional regulator, GntR family Tax=Streptomyces davawensis JCM 4913 RepID=K4REC8_9ACTO
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CCK31820.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM1_60_b1_redo_sep16_scaffold_30_22
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21788..22207)
DNA (420bp) protein (140aa)
protein-methionine-S-oxide reductase (EC:1.8.4.11)
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:KJE25192.1}; EC=1.8.4.12 {ECO:0000313|EMBL:KJE25192.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
Peptide methionine sulfoxide reductase MsrB Tax=Frankia sp. (strain CcI3) RepID=Q2JAQ6_FRASC
PLM1_60_b1_redo_sep16_scaffold_30_23
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(22346..23266)
DNA (921bp) protein (307aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8P6_SPHTD
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM1_60_b1_redo_sep16_scaffold_30_24
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23396..25753)
DNA (2358bp) protein (786aa)
Carbon-monoxide dehydrogenase, large subunit Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LFU3_HALO1
carbon-monoxide dehydrogenase, large subunit
Carbon-monoxide dehydrogenase, large subunit {ECO:0000313|EMBL:ACY14545.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM1_60_b1_redo_sep16_scaffold_30_25
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25750..26274)
DNA (525bp) protein (175aa)
(2Fe-2S)-binding domain protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LFU4_HALO1
(2Fe-2S)-binding domain-containing protein
(2Fe-2S)-binding domain protein {ECO:0000313|EMBL:ACY14546.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM1_60_b1_redo_sep16_scaffold_30_26
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26275..27150)
DNA (876bp) protein (292aa)
Molybdopterin dehydrogenase FAD-binding protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LFU5_HALO1
FAD-binding molybdopterin dehydrogenase protein
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:ACY14547.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM1_60_b1_redo_sep16_scaffold_30_27
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27336..27986)
DNA (651bp) protein (217aa)
Carbon monoxide dehydrogenase subunit G Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LVE8_ACIC1
carbon monoxide dehydrogenase subunit G
Carbon monoxide dehydrogenase subunit G {ECO:0000313|EMBL:ABK53408.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_60_b1_redo_sep16_scaffold_30_28
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(27983..28810)
DNA (828bp) protein (276aa)
Molybdenum hydroxylase accessory protein, YgfJ family Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F6S6_CONWI
molybdenum hydroxylase accessory protein, YgfJ family
Molybdenum hydroxylase accessory protein, YgfJ family {ECO:0000313|EMBL:ADB52724.1}; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM1_60_b1_redo_sep16_scaffold_30_29
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28837..29613)
DNA (777bp) protein (259aa)
Putative uncharacterized protein Tax=Frankia sp. (strain EAN1pec) RepID=A8LDN2_FRASN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW15540.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_60_b1_redo_sep16_scaffold_30_30
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

Not on your lists

comp(29615..29926)
DNA (312bp) protein (104aa)
Putative xanthine dehydrogenase accessory factor subfamily, putative Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L1F2_THERP
putative xanthine dehydrogenase accessory factor subfamily
Putative xanthine dehydrogenase accessory factor subfamily, putative {ECO:0000313|EMBL:ACM04705.1}; species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2).;"
Displaying items 1-30 of 82 in total

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