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PLM1_60_b1_redo_sep16_scaffold_39

Search features with annotation key words

Displaying items 61-86 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_39_61
unknown

Not on your lists

comp(57643..57960)
DNA (318bp) protein (106aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_39_62
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(58089..58982)
DNA (894bp) protein (298aa)
Polar amino acid ABC transporter, inner membrane subunit Tax=Frankia sp. CN3 RepID=G6HHK5_9ACTO
polar amino acid ABC transporter inner membrane protein
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADP82296.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_60_b1_redo_sep16_scaffold_39_63
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59053..59697)
DNA (645bp) protein (215aa)
Polar amino acid ABC transporter, inner membrane subunit Tax=Frankia sp. CN3 RepID=G6HHK6_9ACTO
polar amino acid ABC transporter inner membrane protein
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADP82295.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_60_b1_redo_sep16_scaffold_39_64
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59787..60653)
DNA (867bp) protein (289aa)
ABC-type transporter, periplasmic subunit family 3 Tax=Frankia sp. CN3 RepID=G6HHK7_9ACTO
glutamate ABC transporter glutamate binding protein
Putative glutamate binding protein of ABC transporter system {ECO:0000313|EMBL:CAJ64346.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM1_60_b1_redo_sep16_scaffold_39_65
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(60684..61424)
DNA (741bp) protein (247aa)
arginine ABC transporter ATP-binding protein Tax=Nocardiopsis gilva RepID=UPI00034A8A24
gluA; Glutamate transport ATP-binding protein GluA
Arginine ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGM01020.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
PLM1_60_b1_redo_sep16_scaffold_39_66
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(61636..64317)
DNA (2682bp) protein (894aa)
ATP-dependent chaperone ClpB Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MRL1_SACVD
ATP-dependent chaperone ClpB
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_60_b1_redo_sep16_scaffold_39_67
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(64428..64853)
DNA (426bp) protein (142aa)
Transcriptional regulator, MerR family Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M1X0_ACIFD
MerR family transcriptional regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_60_b1_redo_sep16_scaffold_39_68
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(64880..66028)
DNA (1149bp) protein (383aa)
Chaperone protein DnaJ Tax=Saccharopolyspora erythraea RepID=A4FQP1_SACEN
dnaJ; molecular chaperone
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_60_b1_redo_sep16_scaffold_39_69
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(66104..66895)
DNA (792bp) protein (264aa)
Protein GrpE Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKA8_THEM7
GrpE protein HSP-70 cofactor
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
PLM1_60_b1_redo_sep16_scaffold_39_70
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(67121..69019)
DNA (1899bp) protein (633aa)
Chaperone protein DnaK Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=DNAK_ACIC1
dnaK; molecular chaperone DnaK
Chaperone protein DnaK {ECO:0000255|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000255|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000255|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000255|HAMAP-Rule:MF_00332}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_60_b1_redo_sep16_scaffold_39_71
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(69196..69735)
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NM33_MARHT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PLM1_60_b1_redo_sep16_scaffold_39_72
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

70074..72164
DNA (2091bp) protein (697aa)
CoB--CoM heterodisulfide reductase (EC:1.8.98.1)
CoB--CoM heterodisulfide reductase Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AUV4_FRADG
Anaerobic glycerol-3-phosphate dehydrogenase subunit C {ECO:0000313|EMBL:KJE77198.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
PLM1_60_b1_redo_sep16_scaffold_39_73
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(72190..73182)
DNA (993bp) protein (331aa)
Uncharacterized protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z7C9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KIE53682.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_39_74
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(73238..73807)
DNA (570bp) protein (190aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
deoxycytidine triphosphate deaminase Tax=Corynebacterium bovis RepID=UPI0002193EC5
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_60_b1_redo_sep16_scaffold_39_trna_1
unknown

Not on your lists

73915..73991
DNA (77bp)
transferRNA Gly
PLM1_60_b1_redo_sep16_scaffold_39_75
Salinispora tropica, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

74268..74579
DNA (312bp) protein (104aa)
hypothetical protein Tax=Streptomyces viridosporus RepID=UPI00037C41FB
transposase, IS4 family protein
Transposase, IS4 family {ECO:0000313|EMBL:ABP53469.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).;"
PLM1_60_b1_redo_sep16_scaffold_39_76
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

74984..75679
DNA (696bp) protein (232aa)
RNA-directed DNA polymerase {ECO:0000313|EMBL:EFC78905.1}; EC=2.7.7.49 {ECO:0000313|EMBL:EFC78905.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
RNA-directed DNA polymerase (EC:2.7.7.49)
RNA-directed DNA polymerase Tax=Frankia sp. EUN1f RepID=D3DDV3_9ACTO
PLM1_60_b1_redo_sep16_scaffold_39_77
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(75569..77413)
DNA (1845bp) protein (615aa)
hypothetical protein Tax=Frankia sp. BMG5.12 RepID=UPI000361F6CC
Resolvase domain protein {ECO:0000313|EMBL:EFC79006.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
DNA invertase
PLM1_60_b1_redo_sep16_scaffold_39_78
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(77410..77751)
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Frankia sp. EUN1f RepID=D3DDK1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFC79007.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
PLM1_60_b1_redo_sep16_scaffold_39_79
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

77773..78711
DNA (939bp) protein (313aa)
RNA-directed DNA polymerase {ECO:0000313|EMBL:EFC78905.1}; EC=2.7.7.49 {ECO:0000313|EMBL:EFC78905.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
RNA-directed DNA polymerase (EC:2.7.7.49)
maturase Tax=Streptomyces sp. R1-NS-10 RepID=UPI00035CD2E0
PLM1_60_b1_redo_sep16_scaffold_39_80
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

79315..79599
DNA (285bp) protein (95aa)
Transposase Tax=Streptomyces ghanaensis ATCC 14672 RepID=D6AA08_9ACTO
Transposase {ECO:0000313|EMBL:EFE72103.2}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
transposase
PLM1_60_b1_redo_sep16_scaffold_39_81
Streptomyces sp. NRRL S-104, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(79594..80073)
DNA (480bp) protein (160aa)
Integrase, Lambda phage type Tax=Modestobacter marinus (strain BC501) RepID=I4EUP6_MODMB
Integrase {ECO:0000313|EMBL:KJY23284.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-104.;"
integrase, Lambda phage type
PLM1_60_b1_redo_sep16_scaffold_39_82
unknown

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comp(80121..80459)
DNA (339bp) protein (113aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_39_83
unknown

Not on your lists

comp(80582..80794)
DNA (213bp) protein (71aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_39_84
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

80860..81351
DNA (492bp) protein (164aa)
Tax=RBG_16_Actinobacteria_70_17_curated
PLM1_60_b1_redo_sep16_scaffold_39_85
unknown

Not on your lists

comp(81471..81578)
DNA (108bp) protein (36aa)
Uncharacterized protein Tax=Gordonia rhizosphera NBRC 16068 RepID=K6V0F6_9ACTO
hypothetical protein
Displaying items 61-86 of 86 in total

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