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PLM1_60_b1_redo_sep16_scaffold_57

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_57_1
unknown

Not on your lists

comp(156..773)
DNA (618bp) protein (206aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_57_2
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1717..2637
DNA (921bp) protein (307aa)
Integrase family protein Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P522_STRVO
Phage integrase family protein {ECO:0000313|EMBL:CDO20738.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
integrase
PLM1_60_b1_redo_sep16_scaffold_57_3
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2639..2953
DNA (315bp) protein (105aa)
Uncharacterized protein Tax=Mycobacterium parascrofulaceum ATCC BAA-614 RepID=D5P1K1_9MYCO
XRE family transcriptional regulator {ECO:0000313|EMBL:KDO98422.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. hominissuis 100.;"
putative transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_57_4
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3499..4602
DNA (1104bp) protein (368aa)
Putative uncharacterized protein Tax=Frankia sp. (strain EAN1pec) RepID=A8KXR5_FRASN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW12849.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_60_b1_redo_sep16_scaffold_57_5
Streptomyces gancidicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4771..5313
DNA (543bp) protein (181aa)
Uncharacterized protein Tax=Streptomyces gancidicus BKS 13-15 RepID=M3D2U7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EMF30698.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gancidicus BKS 13-15.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_57_6
Streptomyces sp. Mg1, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6131..6601
DNA (471bp) protein (157aa)
transposase Tax=Streptomyces canus RepID=UPI00037FB7D3
Transposase and inactivated derivatives {ECO:0000313|EMBL:EDX20305.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Mg1.;"
transposase
PLM1_60_b1_redo_sep16_scaffold_57_7
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6629..6973
DNA (345bp) protein (115aa)
Transcriptional regulator, ArsR family Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PY28_STANL
Toxin-antitoxin system, antitoxin component, ArsR family {ECO:0000313|EMBL:EWM65258.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
ArsR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_57_8
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6992..7483
DNA (492bp) protein (164aa)
ATPase Tax=Salinispora pacifica RepID=UPI000374B4D4
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:ABV97973.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-205).;"
PLM1_60_b1_redo_sep16_scaffold_57_9
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7557..7964
DNA (408bp) protein (136aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B5Q1_STRRD
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ACZ91355.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_57_10
unknown

Not on your lists

comp(8132..8263)
DNA (132bp) protein (44aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_57_11
Knoellia aerolata, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8343..8735)
DNA (393bp) protein (131aa)
Transcriptional regulator, MerR family Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A555_CELGA
MerR family transcriptional regulator {ECO:0000313|EMBL:KGN40997.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia aerolata DSM 18566.;"
transcriptional regulator, MerR family
PLM1_60_b1_redo_sep16_scaffold_57_12
Pseudomonas sp. K-62, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8857..9597
DNA (741bp) protein (247aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00037D5EBE
Organomercurial lyase {ECO:0000313|EMBL:BAM13990.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. K-62.;"
Alkylmercury lyase
PLM1_60_b1_redo_sep16_scaffold_57_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9635..10093
DNA (459bp) protein (153aa)
Uncharacterized protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKR5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23553.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_60_b1_redo_sep16_scaffold_57_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10156..10503
DNA (348bp) protein (116aa)
Uncharacterized protein bin=GWC2_Proteo_65_14_Ab886 species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_60_b1_redo_sep16_scaffold_57_15
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10542..11414)
DNA (873bp) protein (291aa)
hypothetical protein Tax=Alicyclobacillus pohliae RepID=UPI00035D8E63
ABC transporter-like protein
ABC transporter related protein {ECO:0000313|EMBL:ADG05283.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) (Bacillus; tusciae).;"
PLM1_60_b1_redo_sep16_scaffold_57_16
unknown

Not on your lists

comp(11462..11797)
DNA (336bp) protein (112aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_57_17
unknown

Not on your lists

comp(11825..12049)
DNA (225bp) protein (75aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_57_18
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12076..12753)
DNA (678bp) protein (226aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00037624D6
clp domain-containing protein
Clp domain protein {ECO:0000313|EMBL:ADL45255.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_57_19
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12760..13002)
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SCV5_GEOOG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB74340.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_57_20
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13304..14746)
DNA (1443bp) protein (481aa)
Rhamnulokinase Tax=Frankia sp. CN3 RepID=G6HE64_9ACTO
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61444.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
carbohydrate kinase FGGY
PLM1_60_b1_redo_sep16_scaffold_57_21
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14784..15446)
DNA (663bp) protein (221aa)
Probable dehydrogenase Tax=Streptomyces fradiae RepID=Q45RA8_STRFR
Short-chain dehydrogenase {ECO:0000313|EMBL:KIF71064.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
short chain dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_57_22
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15385..16830)
DNA (1446bp) protein (482aa)
Short chain dehydrogenase Tax=Streptomyces bingchenggensis (strain BCW-1) RepID=D7BV19_STRBB
short chain dehydrogenase
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61443.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
PLM1_60_b1_redo_sep16_scaffold_57_23
Streptomyces griseoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16838..17263)
DNA (426bp) protein (142aa)
L-rhamnose mutarotase Tax=Streptomyces sp. TOR3209 RepID=UPI0002EF991A
L-rhamnose 1-epimerase {ECO:0000313|EMBL:EFL43005.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_57_24
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17329..18030)
DNA (702bp) protein (234aa)
Sugar ABC transporter substrate-binding protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2P3S6_9ACTO
rhamnose ABC transporter, periplasmic rhamnose-binding protein
Monosaccharide ABC transporter substrate-binding protein, CUT2 family {ECO:0000313|EMBL:EXG80756.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PLM1_60_b1_redo_sep16_scaffold_57_25
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17982..19181)
DNA (1200bp) protein (400aa)
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI000364F5E9
ATPase {ECO:0000313|EMBL:KJK33849.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
inner-membrane translocator
PLM1_60_b1_redo_sep16_scaffold_57_26
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(19729..20994)
DNA (1266bp) protein (422aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI0003770C88
major facilitator superfamily transporter
Tax=GWC2_Nitrospirae_57_9_curated
PLM1_60_b1_redo_sep16_scaffold_57_27
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21321..22082)
DNA (762bp) protein (254aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036DBDF0
Uncharacterized protein {ECO:0000313|EMBL:KHD72783.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_57_28
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22215..22721)
DNA (507bp) protein (169aa)
Globin Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XH77_NAKMY
globin
Globin {ECO:0000313|EMBL:ACV78283.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM1_60_b1_redo_sep16_scaffold_57_29
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22916..23620)
DNA (705bp) protein (235aa)
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SBY4_INTC7
amino acid ABC transporter ATP-binding protein
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family {ECO:0000313|EMBL:ADU49524.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
PLM1_60_b1_redo_sep16_scaffold_57_30
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23613..24389)
DNA (777bp) protein (259aa)
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SBY5_INTC7
amino acid ABC transporter ATP-binding protein
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family {ECO:0000313|EMBL:ADU49525.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
Displaying items 1-30 of 76 in total

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