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PLM1_60_b1_redo_sep16_scaffold_177

Search features with annotation key words

Displaying items 1-30 of 92 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_177_1
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(2..1915)
DNA (1914bp) protein (638aa)
Sensory box/GGDEF Tax=Actinoplanes sp. N902-109 RepID=R4LSR1_9ACTO
Sensory box/GGDEF
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_60_b1_redo_sep16_scaffold_177_2
unknown

Not on your lists

2298..2636
DNA (339bp) protein (113aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_177_3
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(2643..3860)
DNA (1218bp) protein (406aa)
hypothetical protein Tax=Scytonema hofmanni RepID=UPI000346F157
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
PLM1_60_b1_redo_sep16_scaffold_177_4
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4083..5717
DNA (1635bp) protein (545aa)
FAD dependent oxidoreductase Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PZK0_STANL
FAD dependent oxidoreductase
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADD41674.1}; species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
PLM1_60_b1_redo_sep16_scaffold_177_5
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5854..6492)
DNA (639bp) protein (213aa)
Regulatory protein TetR Tax=Micromonospora RepID=D9SZV6_MICAI
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR65772.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
regulatory protein TetR
PLM1_60_b1_redo_sep16_scaffold_177_6
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6707..7921
DNA (1215bp) protein (405aa)
Rieske 2Fe-2S domain protein Tax=Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) RepID=A0QQ78_MYCS2
rieske (2Fe-2S) protein
Rieske (2Fe-2S) region {ECO:0000313|EMBL:AFP37121.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155).;"
PLM1_60_b1_redo_sep16_scaffold_177_7
Pelobacter propionicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7996..8418)
DNA (423bp) protein (141aa)
hypothetical protein Tax=Methylomicrobium buryatense RepID=UPI00036FC4E6
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABL00609.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Pelobacteraceae; Pelobacter.;" source="Pelobacter propionicus (strain DSM 2379).;"
PLM1_60_b1_redo_sep16_scaffold_177_8
RLO_PLX_64_10, Bacteria

Not on your lists

comp(8415..10505)
DNA (2091bp) protein (697aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037F877E
PAS/PAC sensor signal transduction histidine kinase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM1_60_b1_redo_sep16_scaffold_177_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

10726..11751
DNA (1026bp) protein (342aa)
Alpha/beta hydrolase fold Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYN9_RUBXD
alpha/beta hydrolase fold protein domain-containing protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABG03489.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_60_b1_redo_sep16_scaffold_177_10
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11887..12132)
DNA (246bp) protein (82aa)
Alpha/beta hydrolase fold protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S9Y7_GEOOG
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADB73850.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_177_11
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12247..13017)
DNA (771bp) protein (257aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
Putative Dihydrodipicolinate synthase {ECO:0000313|EMBL:CCH87611.1}; EC=4.2.1.52 {ECO:0000313|EMBL:CCH87611.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
Putative Dihydrodipicolinate synthase Tax=Modestobacter marinus (strain BC501) RepID=I4EW48_MODMB
PLM1_60_b1_redo_sep16_scaffold_177_12
unknown

Not on your lists

13560..13709
DNA (150bp) protein (50aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_177_13
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

13846..14640
DNA (795bp) protein (265aa)
Chromosome partitioning protein Soj Tax=uncultured candidate division OP1 bacterium RepID=H5SSR7_9BACT
Chromosome partitioning protein Soj {ECO:0000313|EMBL:BAL59203.1}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
parA; Chromosome partitioning protein ParA
PLM1_60_b1_redo_sep16_scaffold_177_14
unknown

Not on your lists

14600..15304
DNA (705bp) protein (235aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_177_15
unknown

Not on your lists

15637..15825
DNA (189bp) protein (63aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_177_16
Streptomyces mobaraensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16328..17287
DNA (960bp) protein (320aa)
PGA-cap protein Tax=Streptomyces mobaraensis NBRC 13819 = DSM 40847 RepID=M3A761_STRMB
PGA-cap protein {ECO:0000313|EMBL:EMF00984.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mobaraensis NBRC 13819 = DSM 40847.;"
poly-gamma-glutamate biosynthesis protein
PLM1_60_b1_redo_sep16_scaffold_177_17
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17304..17519)
DNA (216bp) protein (72aa)
Polysaccharide deacetylase Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JZN4_STREN
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR62272.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
xylanase/chitin deacetylase
PLM1_60_b1_redo_sep16_scaffold_177_18
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17607..19475)
DNA (1869bp) protein (623aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI0003613F32
Uncharacterized protein {ECO:0000313|EMBL:CCM64789.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
PLM1_60_b1_redo_sep16_scaffold_177_19
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19921..20481
DNA (561bp) protein (187aa)
Putative bifunctional deaminase-reductase-like protein Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82IB4_STRAW
hypothetical protein
Putative bifunctional deaminase-reductase-like protein {ECO:0000313|EMBL:BAC70955.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
PLM1_60_b1_redo_sep16_scaffold_177_20
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20524..21492
DNA (969bp) protein (323aa)
Short chain dehydrogenase Tax=Rhodococcus ruber BKS 20-38 RepID=M2YU45_9NOCA
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ETT25676.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
short chain dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_177_21
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21806..22930
DNA (1125bp) protein (375aa)
Valine dehydrogenase Tax=Actinomadura atramentaria RepID=UPI000367BE3F
Glu/Leu/Phe/Val dehydrogenase dimerization region
Glu/Leu/Phe/Val dehydrogenase dimerization region {ECO:0000313|EMBL:ACY95900.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_177_22
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23023..24282)
DNA (1260bp) protein (420aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
Two-component system sensor kinase Tax=Streptomyces rimosus subsp. rimosus ATCC 10970 RepID=L8ERB4_STRRM
two-component system sensor kinase
PLM1_60_b1_redo_sep16_scaffold_177_23
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24279..24974)
DNA (696bp) protein (232aa)
Response regulator Tax=Streptomyces griseoaurantiacus M045 RepID=F3NGU1_9ACTO
Response regulator {ECO:0000313|EMBL:EGG47431.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
two-component system response regulator
PLM1_60_b1_redo_sep16_scaffold_177_24
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

25106..26173
DNA (1068bp) protein (356aa)
epimerase (EC:5.1.3.2)
Putative UDP-glucose 4-epimerase Tax=Micromonospora lupini str. Lupac 08 RepID=I0L5S5_9ACTO
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_60_b1_redo_sep16_scaffold_177_25
Salmonella phage 9NA, Caudovirales, Viruses

Not on your lists

comp(26181..27608)
DNA (1428bp) protein (476aa)
Uncharacterized protein {ECO:0000313|EMBL:AIB07069.1}; species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Salmonella phage 9NA.;"
PLM1_60_b1_redo_sep16_scaffold_177_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

27721..28440
DNA (720bp) protein (240aa)
Putative glycosyltransferase Tax=Patulibacter medicamentivorans RepID=H0E0V1_9ACTN
family 2 glycosyl transferase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_b1_redo_sep16_scaffold_177_27
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

28437..29270
DNA (834bp) protein (278aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_b1_redo_sep16_scaffold_177_28
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29163..29990)
DNA (828bp) protein (276aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI00036CAA2F
Uncharacterized protein {ECO:0000313|EMBL:CCM65970.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
radical SAM domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_177_29
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29987..30544)
DNA (558bp) protein (186aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
Uncharacterized protein Tax=Candidatus Microthrix parvicella RN1 RepID=R4Z776_9ACTN
peroxidase-like protein
PLM1_60_b1_redo_sep16_scaffold_177_30
unknown

Not on your lists

comp(30571..31113)
DNA (543bp) protein (181aa)
DoxX family protein Tax=Mycobacterium tusciae JS617 RepID=H1JYQ6_9MYCO
Displaying items 1-30 of 92 in total

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