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PLM1_60_b1_redo_sep16_scaffold_221

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_221_1
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1..111
DNA (111bp) protein (37aa)
Uncharacterized protein (Fragment) Tax=mine drainage metagenome RepID=T1C251_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KJE77768.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
PLM1_60_b1_redo_sep16_scaffold_221_2
Streptomyces sp. JCM 9888, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(137..385)
DNA (249bp) protein (83aa)
Putative transposase Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N371_KITSK
Putative transposase {ECO:0000313|EMBL:AJF34499.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. JCM 9888.;"
putative transposase
PLM1_60_b1_redo_sep16_scaffold_221_3
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(489..893)
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FDX0_VERMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHH99824.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
PLM1_60_b1_redo_sep16_scaffold_221_4
Streptomyces sp. RSD-27, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(942..1883)
DNA (942bp) protein (314aa)
LysR family transcriptional regulator Tax=Streptomyces sp. C RepID=D9VUK7_9ACTO
Transcriptional regulator {ECO:0000313|EMBL:KIF06557.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;"
LysR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_221_5
Kitasatospora cheerisanensis, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1984..2715
DNA (732bp) protein (244aa)
aspartate racemase Tax=Streptomyces sp. AA0539 RepID=UPI0002D5A0E6
Uncharacterized protein {ECO:0000313|EMBL:KDN87455.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora cheerisanensis KCTC 2395.;"
putative aspartate/glutamate racemase
PLM1_60_b1_redo_sep16_scaffold_221_6
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3125..3592
DNA (468bp) protein (156aa)
Acetyltransferase Tax=Mycobacterium smegmatis JS623 RepID=L0J1R1_MYCSM
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:AGB24196.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
PLM1_60_b1_redo_sep16_scaffold_221_7
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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3746..5506
DNA (1761bp) protein (587aa)
ATP-dependent DNA ligase (EC:6.5.1.1)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036A1C6C
Tax=CSP1_3_Armatimonadetes
PLM1_60_b1_redo_sep16_scaffold_221_8
Microbacterium oleivorans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5538..6473
DNA (936bp) protein (312aa)
5''''-3'''' exonuclease Tax=Microbacterium sp. 11MF RepID=UPI00037DD9A1
5'-3' exonuclease {ECO:0000313|EMBL:EZP29490.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oleivorans.;"
DNA polymerase I
PLM1_60_b1_redo_sep16_scaffold_221_9
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6618..7529)
DNA (912bp) protein (304aa)
DNA polymerase LigD polymerase domain Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFE5_ANADF
DNA polymerase LigD polymerase subunit
DNA polymerase LigD polymerase domain {ECO:0000313|EMBL:ABS27441.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain Fw109-5).;"
PLM1_60_b1_redo_sep16_scaffold_221_10
Xylanimonas cellulosilytica, Xylanimonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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7872..8636
DNA (765bp) protein (255aa)
Uncharacterized protein Tax=Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990 / XIL07) RepID=D1C111_XYLCX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ32477.1}; species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Xylanimonas.;" source="Xylanimonas cellulosilytica (strain DSM 15894 / CECT 5975 / LMG 20990; / XIL07).;"
PLM1_60_b1_redo_sep16_scaffold_221_11
Streptomyces lividans, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8872..9252)
DNA (381bp) protein (127aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2NDI8_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIJ16005.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces lividans TK24.;"
PLM1_60_b1_redo_sep16_scaffold_221_12
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9436..9903)
DNA (468bp) protein (156aa)
cyclase Tax=Saccharomonospora halophila RepID=UPI0003751688
polyketide cyclase / dehydrase family protein
Cyclase {ECO:0000313|EMBL:EFL14718.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
PLM1_60_b1_redo_sep16_scaffold_221_13
Arthrospira sp. PCC 8005, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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10070..12439
DNA (2370bp) protein (790aa)
Putative Long-chain-fatty-acid--CoA ligase (Acyl-CoA synthetase) {ECO:0000313|EMBL:CCE20495.1}; EC=6.2.1.3 {ECO:0000313|EMBL:CCE20495.1};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira sp. PCC 8005.;"
AMP-dependent synthetase and ligase Tax=Arthrospira RepID=K1WER5_ARTPT
probable acyl-CoA synthase
PLM1_60_b1_redo_sep16_scaffold_221_14
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12429..15791
DNA (3363bp) protein (1121aa)
Non-ribosomal peptide synthetase Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CAU3_MYXFH
non-ribosomal peptide synthetase
Non-ribosomal peptide synthetase {ECO:0000313|EMBL:AEI67145.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
PLM1_60_b1_redo_sep16_scaffold_221_15
Mycobacterium thermoresistibile, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15850..17874
DNA (2025bp) protein (675aa)
Amino acid adenylation Tax=Mycobacterium thermoresistibile ATCC 19527 RepID=G7CLR8_MYCTH
Amino acid adenylation {ECO:0000313|EMBL:EHI10871.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium thermoresistibile ATCC 19527.;"
thioester reductase
PLM1_60_b1_redo_sep16_scaffold_221_16
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17862..21839)
DNA (3978bp) protein (1326aa)
WD repeat protein Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WPS4_METH6
WD repeat protein
WD repeat protein {ECO:0000313|EMBL:AET65436.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
PLM1_60_b1_redo_sep16_scaffold_221_17
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22190..22990)
DNA (801bp) protein (267aa)
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:AAU18123.1}; EC=2.7.8.- {ECO:0000313|EMBL:AAU18123.1};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus (strain ZK / E33L).;"
4'-phosphopantetheinyl transferase Tax=Bacillus cereus F837/76 RepID=G8UEJ1_BACCE
4'-phosphopantetheinyl transferase
PLM1_60_b1_redo_sep16_scaffold_221_18
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23221..24000)
DNA (780bp) protein (260aa)
Putative uncharacterized protein Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67Q59_SYMTH
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAD40184.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
PLM1_60_b1_redo_sep16_scaffold_221_19
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23997..24857)
DNA (861bp) protein (287aa)
ABC-type uncharacterized transport system, permease component Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EJI6_THECK
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AJY77864.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
PLM1_60_b1_redo_sep16_scaffold_221_20
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24854..25798)
DNA (945bp) protein (315aa)
ABC transporter related Tax=Paenibacillus sp. (strain JDR-2) RepID=C6D5Q1_PAESJ
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACT02596.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
PLM1_60_b1_redo_sep16_scaffold_221_21
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26163..26378)
DNA (216bp) protein (72aa)
Acetyltransferase (GNAT) family protein Tax=Mycobacterium sp. (strain JDM601) RepID=F5YW02_MYCSD
GNAT family acetyltransferase
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:AEF35249.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain JDM601).;"
PLM1_60_b1_redo_sep16_scaffold_221_22
Gordonia neofelifaecis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26796..27164)
DNA (369bp) protein (123aa)
RNA-binding S4 domain-containing protein Tax=Gordonia neofelifaecis NRRL B-59395 RepID=F1YM73_9ACTO
RNA-binding S4 domain-containing protein {ECO:0000313|EMBL:EGD54324.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia neofelifaecis NRRL B-59395.;"
RNA-binding S4 domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_221_23
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

28250..28714
DNA (465bp) protein (155aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C748_SPHTD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ37809.1}; species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
PLM1_60_b1_redo_sep16_scaffold_221_24
RLO_PLX_64_10, Bacteria

Not on your lists

comp(29086..30057)
DNA (972bp) protein (324aa)
hypothetical protein Tax=Paenibacillus terrigena RepID=UPI00036E7B67
alcohol dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM1_60_b1_redo_sep16_scaffold_221_25
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30287..30967
DNA (681bp) protein (227aa)
Transcriptional regulator, TetR family Tax=Streptomyces ipomoeae 91-03 RepID=L1KZG7_9ACTO
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EKX65934.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
TetR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_221_26
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31661..36016
DNA (4356bp) protein (1452aa)
hypothetical protein Tax=Actinokineospora enzanensis RepID=UPI00035DADD1
FtsK/SpoIIIE family protein,FHA domain-containing protein {ECO:0000313|EMBL:KJE23053.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_221_27
unknown

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comp(36025..36747)
DNA (723bp) protein (241aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_221_28
unknown

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comp(36794..37636)
DNA (843bp) protein (281aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_221_29
unknown

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comp(37633..38808)
DNA (1176bp) protein (392aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_221_30
unknown

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comp(38828..39091)
DNA (264bp) protein (88aa)

This feature has no annotations

Displaying items 1-30 of 40 in total

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