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PLM1_60_b1_redo_sep16_scaffold_261

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_261_1
unknown

Not on your lists

comp(2..136)
DNA (135bp) protein (45aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_261_2
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(177..653)
DNA (477bp) protein (159aa)
Uncharacterized protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CKR5_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23553.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_60_b1_redo_sep16_scaffold_261_3
Pseudomonas sp. K-62, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(695..1435)
DNA (741bp) protein (247aa)
Organomercurial lyase Tax=Pseudomonas sp. K-62 RepID=I2FG55_9PSED
Organomercurial lyase {ECO:0000313|EMBL:BAM13990.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. K-62.;"
Alkylmercury lyase
PLM1_60_b1_redo_sep16_scaffold_261_4
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1561..1953
DNA (393bp) protein (131aa)
Transcriptional regulator, MerR family Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A422_CELGA
MerR family transcriptional regulator {ECO:0000313|EMBL:KGN36269.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
transcriptional regulator, MerR family
PLM1_60_b1_redo_sep16_scaffold_261_5
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2007..3245)
DNA (1239bp) protein (413aa)
Integrase Tax=Frankia alni (strain ACN14a) RepID=Q0RPW7_FRAAA
integrase
Integrase {ECO:0000313|EMBL:CAJ60412.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
PLM1_60_b1_redo_sep16_scaffold_261_trna_1
unknown

Not on your lists

3400..3480
DNA (81bp)
transferRNA Val
PLM1_60_b1_redo_sep16_scaffold_261_6
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4036..4659
DNA (624bp) protein (208aa)
Mg2 transporter protein CorA family protein Tax=Frankia sp. (strain EuI1c) RepID=E3IZQ8_FRASU
Magnesium transporter {ECO:0000313|EMBL:EWT00181.1}; species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
Mg2 transporter protein CorA
PLM1_60_b1_redo_sep16_scaffold_261_7
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5046..5987
DNA (942bp) protein (314aa)
Putative lipoprotein Tax=Frankia sp. (strain EuI1c) RepID=E3ITY4_FRASU
lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:ADP80031.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_60_b1_redo_sep16_scaffold_261_8
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6299..7537)
DNA (1239bp) protein (413aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase Tax=Amycolatopsis decaplanina DSM 44594 RepID=M2YZ98_9PSEU
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:EWM15369.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
protein-L-isoaspartate O-methyltransferase
PLM1_60_b1_redo_sep16_scaffold_261_9
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7695..8609
DNA (915bp) protein (305aa)
Uncharacterized protein Tax=Frankia sp. QA3 RepID=I9KJ14_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EIV94248.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_261_10
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8912..9553
DNA (642bp) protein (214aa)
Uncharacterized protein Tax=Actinomadura madurae LIID-AJ290 RepID=U2N3W0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:ETK36760.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_261_11
Streptomyces fradiae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9925..11397
DNA (1473bp) protein (491aa)
hypothetical protein Tax=Streptomyces sulphureus RepID=UPI00036C4EBC
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:KDS84847.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces fradiae (Streptomyces roseoflavus).;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_261_12
unknown

Not on your lists

comp(11724..11963)
DNA (240bp) protein (80aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_261_13
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12228..13811)
DNA (1584bp) protein (528aa)
Possible sodium/hydrogen antiporter Tax=Saccharopolyspora erythraea RepID=A4FJ25_SACEN
nha; sodium/hydrogen antiporter
Possible sodium/hydrogen antiporter {ECO:0000313|EMBL:CAM04050.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea (strain NRRL 23338).;"
PLM1_60_b1_redo_sep16_scaffold_261_14
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14247..15212
DNA (966bp) protein (322aa)
Fumarylacetoacetate (FAA) hydrolase Tax=Streptomyces violaceusniger Tu 4113 RepID=G2NUH2_STRVO
fumarylacetoacetate (FAA) hydrolase
Fumarylacetoacetate (FAA) hydrolase {ECO:0000313|EMBL:AEM84350.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
PLM1_60_b1_redo_sep16_scaffold_261_15
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

15209..15703
DNA (495bp) protein (165aa)
hypothetical protein bin=bin8_Chloro species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
Tax=CSP1_4_Chloroflexi
PLM1_60_b1_redo_sep16_scaffold_261_16
RBG_16_Actinobacteria_67_15_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

15747..16544
DNA (798bp) protein (266aa)
putative thioredoxin; K05838 putative thioredoxin bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
thioredoxin
Tax=RBG_16_Actinobacteria_67_15_curated
PLM1_60_b1_redo_sep16_scaffold_261_17
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


16672..18090
DNA (1419bp) protein (473aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01571}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01571};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01571}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
prolyl-tRNA synthetase Tax=Streptomyces rapamycinicus RepID=UPI0003830E8B
prolyl-tRNA synthetase
PLM1_60_b1_redo_sep16_scaffold_261_18
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18221..19813
DNA (1593bp) protein (531aa)
Uncharacterized protein Tax=Streptomyces davawensis JCM 4913 RepID=K4RCC7_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK30504.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM1_60_b1_redo_sep16_scaffold_261_19
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19813..21174
DNA (1362bp) protein (454aa)
Putative uncharacterized protein Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X8V3_STRVR
Putative uncharacterized protein {ECO:0000313|EMBL:EFL36357.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes DSM 40736.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_261_20
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21174..25487
DNA (4314bp) protein (1438aa)
Putative uncharacterized protein Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9X8V4_STRVR
Putative uncharacterized protein {ECO:0000313|EMBL:EFL36358.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes DSM 40736.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_261_21
Streptomyces davawensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25498..26787
DNA (1290bp) protein (430aa)
Uncharacterized protein Tax=Streptomyces davawensis JCM 4913 RepID=K4RB68_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK30507.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces davawensis JCM 4913.;"
PLM1_60_b1_redo_sep16_scaffold_261_22
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26922..27650
DNA (729bp) protein (243aa)
hypothetical protein Tax=Frankia sp. BMG5.12 RepID=UPI00037405AA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH10348.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM1_60_b1_redo_sep16_scaffold_261_23
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27688..28155
DNA (468bp) protein (156aa)
Fructose-2,6-bisphosphatase Tax=Saccharomonospora azurea RepID=H8G7P2_9PSEU
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:EHK84476.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea SZMC 14600.;"
fructose-2,6-bisphosphatase
PLM1_60_b1_redo_sep16_scaffold_261_24
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28152..28697)
DNA (546bp) protein (182aa)
Uncharacterized protein Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UTE6_9MICO
FxsA cytoplasmic membrane protein
Tax=BJP_IG2158_Rhodobacterales_69_12
PLM1_60_b1_redo_sep16_scaffold_261_25
unknown

Not on your lists

comp(29275..29457)
DNA (183bp) protein (61aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_261_26
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29479..30372)
DNA (894bp) protein (298aa)
Putative cyclase Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H9C9_ACTM4
putative cyclase
Putative cyclase {ECO:0000313|EMBL:BAL89616.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_261_27
unknown

Not on your lists

30764..31156
DNA (393bp) protein (131aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_261_28
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31161..32249
DNA (1089bp) protein (363aa)
Nucleotidyl transferase Tax=Anaeromyxobacter sp. (strain K) RepID=B4UE03_ANASK
nucleotidyl transferase
Nucleotidyl transferase {ECO:0000313|EMBL:ACG74961.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
PLM1_60_b1_redo_sep16_scaffold_261_29
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32278..32778)
DNA (501bp) protein (167aa)
Response regulator receiver modulated serine phosphatase Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A8L6_THECD
response regulator receiver modulated serine phosphatase
Response regulator receiver modulated serine phosphatase {ECO:0000313|EMBL:ACY96711.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
Displaying items 1-30 of 39 in total

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