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PLM1_60_b1_redo_sep16_scaffold_339

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_339_1
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3..113
DNA (111bp) protein (37aa)
Uncharacterized protein (Fragment) Tax=mine drainage metagenome RepID=T1C251_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KJE77768.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
PLM1_60_b1_redo_sep16_scaffold_339_2
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(94..615)
DNA (522bp) protein (174aa)
Hydrolase, alpha/beta domain protein Tax=Paenibacillus RepID=F5LRA8_9BACL
hydrolase
Hydrolase, alpha/beta domain protein {ECO:0000313|EMBL:EGL15160.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
PLM1_60_b1_redo_sep16_scaffold_339_3
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

868..1392
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Pseudomonas sp. GM49 RepID=J2SCY5_9PSED
Dehydrogenase {ECO:0000313|EMBL:KGM30422.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
Conserved hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_339_4
Saccharomonospora viridis, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1840..2028
DNA (189bp) protein (63aa)
Putative uncharacterized protein Tax=Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 / NBRC 12207 / P101) RepID=C7MV41_SACVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU96993.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora viridis (strain ATCC 15386 / DSM 43017 / JCM 3036 /; NBRC 12207 / P101).;"
PLM1_60_b1_redo_sep16_scaffold_339_5
Streptomyces cattleya, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2063..2695)
DNA (633bp) protein (211aa)
Methylase involved in ubiquinone/menaquinone biosynthesis Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8K4F1_STREN
methylase involved in ubiquinone/menaquinone biosynthesis
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AEW95106.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC; 14057 / NRRL 8057).;"
PLM1_60_b1_redo_sep16_scaffold_339_6
Streptomyces sp. 150FB, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3021..3545)
DNA (525bp) protein (175aa)
pyridoxamine 5''''-phosphate oxidase Tax=Amycolatopsis nigrescens RepID=UPI00038162EF
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:KIF72924.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 150FB.;"
pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
PLM1_60_b1_redo_sep16_scaffold_339_7
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(3768..4148)
DNA (381bp) protein (127aa)
Bifunctional deaminase-reductase domain protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CIT5_THET1
bifunctional deaminase-reductase domain-containing protein
Bifunctional deaminase-reductase domain protein {ECO:0000313|EMBL:ACZ43655.1}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM1_60_b1_redo_sep16_scaffold_339_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4431..5126)
DNA (696bp) protein (232aa)
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_60_b1_redo_sep16_scaffold_339_9
unknown

Not on your lists

comp(5283..5432)
DNA (150bp) protein (50aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_339_10
Meiothermus silvanus, Meiothermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

5804..6364
DNA (561bp) protein (187aa)
GCN5-related N-acetyltransferase Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BAQ0_MEISD
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADH62572.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Meiothermus.;" source="Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) (Thermus; silvanus).;"
PLM1_60_b1_redo_sep16_scaffold_339_11
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

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comp(7327..8079)
DNA (753bp) protein (251aa)
hypothetical protein Tax=Amycolatopsis methanolica RepID=UPI00037C2407
putative secreted protein
Tax=RBG_16_RIF_CHLX_69_14_curated
PLM1_60_b1_redo_sep16_scaffold_339_12
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8384..11827)
DNA (3444bp) protein (1148aa)
Putative Glutamine--fructose-6-phosphate transaminase (Isomerizing) {ECO:0000313|EMBL:CCM62468.1}; EC=2.6.1.16 {ECO:0000313|EMBL:CCM62468.1};; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
glmS; putative glucosamine-6-phosphate synthase (EC:2.6.1.16)
Putative Glutamine--fructose-6-phosphate transaminase (Isomerizing) Tax=Candidatus Microthrix parvicella RN1 RepID=R4YWQ5_9ACTN
PLM1_60_b1_redo_sep16_scaffold_339_13
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(12114..14819)
DNA (2706bp) protein (902aa)
alpha-mannosidase-like protein; K01191 alpha-mannosidase [EC:3.2.1.24] bin=bin8_Chloro species=Streptomyces sp. AA1529 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
alpha-mannosidase-like protein
Tax=CSP1_4_Chloroflexi
PLM1_60_b1_redo_sep16_scaffold_339_14
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15097..15498
DNA (402bp) protein (134aa)
hypothetical protein Tax=Frankia sp. BCU110501 RepID=UPI00035E38F1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL46679.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
PLM1_60_b1_redo_sep16_scaffold_339_15
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15686..16861
DNA (1176bp) protein (392aa)
Uncharacterized protein Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GY65_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL85702.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_339_16
Streptomyces cyaneogriseus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16917..18023)
DNA (1107bp) protein (369aa)
glycosyltransferase Tax=Curtobacterium ginsengisoli RepID=UPI0003B32C07
glycosyltransferase
Streptomyces cyaneogriseus subsp. noncyanogenus strain NMWT 1, complete genome {ECO:0000313|EMBL:AJP04455.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces cyaneogriseus subsp. noncyanogenus.;"
PLM1_60_b1_redo_sep16_scaffold_339_17
Homo sapiens, Homo, Primates, Mammalia, Chordata, Metazoa

Not on your lists

comp(18330..19583)
DNA (1254bp) protein (418aa)
PREDICTED: mucin-2-like Tax=Maylandia zebra RepID=UPI000329A729
Major facilitator superfamily MFS_1
Mucin-2; Short=MUC-2;; Intestinal mucin-2; Flags: Precursor;; species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.;" source="Homo sapiens (Human).;"
PLM1_60_b1_redo_sep16_scaffold_339_18
RBG_16_Gammaproteobacteria_66_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19700..23521)
DNA (3822bp) protein (1274aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CVT5_TRURR
diguanylate cyclase/phosphodiesterase
Tax=RBG_16_Gammaproteobacteria_66_13_curated
PLM1_60_b1_redo_sep16_scaffold_339_19
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23525..25237)
DNA (1713bp) protein (571aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI0003651F31
aprX; peptidase S8 and S53 subtilisin kexin sedolisin
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:AEV81404.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
PLM1_60_b1_redo_sep16_scaffold_339_20
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

comp(25721..26407)
DNA (687bp) protein (229aa)
Nitrate/nitrite response regulator Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NYZ9_AROAE
narL; nitrate/nitrite response regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_60_b1_redo_sep16_scaffold_339_21
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26833..27519
DNA (687bp) protein (229aa)
Sensor kinase two-component system Tax=Patulibacter medicamentivorans RepID=H0E5G1_9ACTN
Sensory box histidine kinase/response regulator {ECO:0000313|EMBL:KFE68318.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
PLM1_60_b1_redo_sep16_scaffold_339_22
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27516..28199
DNA (684bp) protein (228aa)
Putative two-component system response regulator Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4N1N6_KITSK
putative two-component system response regulator
Putative two-component system response regulator {ECO:0000313|EMBL:BAJ32070.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
PLM1_60_b1_redo_sep16_scaffold_339_23
Kitasatospora setae, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28388..28837
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC A-0304 / NBRC 14216 / KM-6054) RepID=E4NA44_KITSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ28075.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora setae (strain ATCC 33774 / DSM 43861 / JCM 3304 / KCC; A-0304 / NBRC 14216 / KM-6054) (Streptomyces setae).;"
PLM1_60_b1_redo_sep16_scaffold_339_24
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28895..29314
DNA (420bp) protein (140aa)
Putative uncharacterized protein Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A9N8_THECD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY98724.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
PLM1_60_b1_redo_sep16_scaffold_339_25
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29511..30704)
DNA (1194bp) protein (398aa)
Ribonuclease BN Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K6A8_NITWC
Ribonuclease {ECO:0000313|EMBL:KJB96387.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
ribonuclease BN
PLM1_60_b1_redo_sep16_scaffold_339_26
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

30947..31957
DNA (1011bp) protein (337aa)
hypothetical protein bin=bin8_Chloro species=Oscillochloris trichoides genus=Oscillochloris taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_60_b1_redo_sep16_scaffold_339_27
unknown

Not on your lists

comp(31977..32192)
DNA (216bp) protein (72aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_339_28
Desulfurobacterium thermolithotrophum, Desulfurobacterium, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists

comp(32378..32962)
DNA (585bp) protein (195aa)
adenylate kinase (EC:2.7.4.3)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331};; ATP-AMP transphosphorylase {ECO:0000256|HAMAP-Rule:MF_00235}; ATP:AMP phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00235}; Adenylate monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00235}; species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Desulfurobacterium.;" source="Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA).;"
Adenylate kinase Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S1E1_DESTD
PLM1_60_b1_redo_sep16_scaffold_339_29
Streptomyces sp. RSD-27, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33183..33671)
DNA (489bp) protein (163aa)
hypothetical protein Tax=Streptomyces scabrisporus RepID=UPI0003711ADD
Acetyltransferase {ECO:0000313|EMBL:KIF03173.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;"
GCN5-related N-acetyltransferase
PLM1_60_b1_redo_sep16_scaffold_339_trna_1
unknown

Not on your lists

33792..33865
DNA (74bp)
transferRNA His
Displaying items 1-30 of 39 in total

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