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PLM1_60_b1_redo_sep16_scaffold_384

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_384_1
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21..473)
DNA (453bp) protein (151aa)
Histidinol-phosphate phosphatase Tax=Micromonospora sp. ATCC 39149 RepID=C4RQY0_9ACTO
histidinol-phosphate phosphatase
Histidinol-phosphate phosphatase {ECO:0000313|EMBL:EEP71536.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
PLM1_60_b1_redo_sep16_scaffold_384_2
unknown

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551..1510
DNA (960bp) protein (320aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_384_3
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1515..2606)
DNA (1092bp) protein (364aa)
Transposase IS116/IS110/IS902 family protein Tax=Burkholderia RepID=B2T0U3_BURPP
transposase IS116/IS110/IS902 family protein
Transposase {ECO:0000313|EMBL:KHL10297.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
PLM1_60_b1_redo_sep16_scaffold_384_4
unknown

Not on your lists

comp(3552..3752)
DNA (201bp) protein (67aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_384_5
unknown

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4048..4137
DNA (90bp) protein (30aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_384_6
unknown

Not on your lists

comp(4406..4693)
DNA (288bp) protein (96aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_384_7
unknown

Not on your lists

5282..5875
DNA (594bp) protein (198aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_384_8
unknown

Not on your lists

5905..6216
DNA (312bp) protein (104aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_384_9
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6197..6688)
DNA (492bp) protein (164aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00037DAE96
hypothetical protein
UPF0234 protein AMIS_5790 {ECO:0000256|HAMAP-Rule:MF_00632}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_384_10
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

6908..7819
DNA (912bp) protein (304aa)
hypothetical protein bin=bin8_Chloro species=Actinoplanes globisporus genus=Actinoplanes taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
hypothetical protein
Tax=CSP1_4_Chloroflexi
PLM1_60_b1_redo_sep16_scaffold_384_11
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(7969..8694)
DNA (726bp) protein (242aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000313|EMBL:KJE24676.1}; EC=3.2.2.- {ECO:0000313|EMBL:KJE24676.1};; EC=4.2.99.18 {ECO:0000313|EMBL:KJE24676.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
end8; endonuclease VIII (EC:3.2.2.23)
hypothetical protein Tax=Frankia sp. BCU110501 RepID=UPI00037C1846
PLM1_60_b1_redo_sep16_scaffold_384_12
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8874..13658)
DNA (4785bp) protein (1595aa)
ATP-dependent DNA helicase Tax=Amycolatopsis mediterranei RepID=G0G664_AMYMS
ATP-dependent DNA helicase {ECO:0000313|EMBL:AEK40868.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
lhr; ATP-dependent DNA helicase
PLM1_60_b1_redo_sep16_scaffold_384_13
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13804..17895
DNA (4092bp) protein (1364aa)
2-oxoglutarate dehydrogenase, E1 subunit Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SEU7_GEOOG
2-oxoglutarate dehydrogenase, E1 subunit {ECO:0000313|EMBL:ADB76733.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
2-oxoglutarate dehydrogenase, E1 subunit
PLM1_60_b1_redo_sep16_scaffold_384_14
Streptomyces rapamycinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17938..18324
DNA (387bp) protein (129aa)
histidine kinase Tax=Streptomyces rapamycinicus RepID=UPI000383036B
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AGP55134.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rapamycinicus NRRL 5491.;"
PLM1_60_b1_redo_sep16_scaffold_384_15
unknown

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comp(18329..18961)
DNA (633bp) protein (211aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_384_16
Ilumatobacter coccineus, Ilumatobacter, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(19304..21055)
DNA (1752bp) protein (584aa)
putative thymidylate synthase (EC:2.1.1.-)
Putative thymidylate synthase {ECO:0000313|EMBL:BAN02909.1}; EC=2.1.1.- {ECO:0000313|EMBL:BAN02909.1};; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ilumatobacter.;" source="Ilumatobacter coccineus YM16-304.;"
Putative thymidylate synthase Tax=Ilumatobacter coccineus YM16-304 RepID=M5A335_9ACTN
PLM1_60_b1_redo_sep16_scaffold_384_17
Propionibacterium acidipropionici, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21052..22086)
DNA (1035bp) protein (345aa)
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018030};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM; 6432 / NBRC 12425 / NCIMB 8070).;"
dihydrodipicolinate reductase Tax=Brachybacterium paraconglomeratum RepID=UPI00026C7084
PLM1_60_b1_redo_sep16_scaffold_384_18
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22230..23015)
DNA (786bp) protein (262aa)
Putative uncharacterized protein Tax=Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 / NBRC 16125 / INA 9442) RepID=D9SZC3_MICAI
Integral membrane protein {ECO:0000313|EMBL:EWM67279.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_384_19
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23097..23864
DNA (768bp) protein (256aa)
GCN5-related N-acetyltransferase Tax=Micromonospora lupini str. Lupac 08 RepID=I0KXV9_9ACTO
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CCH16406.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_384_20
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23917..24921
DNA (1005bp) protein (335aa)
Oxidoreductase molybdopterin binding protein Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SA26_GEOOG
molybdopterin binding oxidoreductase protein
Oxidoreductase molybdopterin binding protein {ECO:0000313|EMBL:ADB75841.1}; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
PLM1_60_b1_redo_sep16_scaffold_384_21
Hordeum vulgare, Hordeum, Poales, commelinids, Streptophyta, Viridiplantae

Not on your lists

comp(24988..25353)
DNA (366bp) protein (122aa)
Uncharacterized protein Tax=Hordeum vulgare var. distichum RepID=M0Y0C7_HORVD
Uncharacterized protein {ECO:0000313|EnsemblPlants:MLOC_6463.1}; species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.;" source="Hordeum vulgare var. distichum (Domesticated barley).;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_384_22
Streptomyces sp. RSD-27, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25409..27079
DNA (1671bp) protein (557aa)
hypothetical protein Tax=Streptomyces somaliensis RepID=UPI00029B53AB
Uncharacterized protein {ECO:0000313|EMBL:KIF03276.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. RSD-27.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_384_23
Streptomyces sp. Tu 6176, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27015..27692)
DNA (678bp) protein (226aa)
hypothetical protein Tax=Streptomyces sp. PsTaAH-124 RepID=UPI000371B680
Uncharacterized protein {ECO:0000313|EMBL:EYT79883.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. Tu 6176.;"
PLM1_60_b1_redo_sep16_scaffold_384_24
unknown

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27781..28896
DNA (1116bp) protein (372aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_384_25
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29131..30192
DNA (1062bp) protein (354aa)
Uncharacterized protein {ECO:0000313|EMBL:EUA20609.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi 3993.;"
PLM1_60_b1_redo_sep16_scaffold_384_26
Mycobacterium intracellulare, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30192..32561
DNA (2370bp) protein (790aa)
Putative uncharacterized protein Tax=uncultured marine bacterium RepID=B7X9Y0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EUA58952.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium intracellulare 1956.;"
PLM1_60_b1_redo_sep16_scaffold_384_27
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32714..33814)
DNA (1101bp) protein (367aa)
hypothetical protein Tax=Streptomyces sp. R1-NS-10 RepID=UPI00035FB773
IS110 family transposase
Putative IS110 family ISLxx2-like transposase {ECO:0000313|EMBL:BAC75223.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
PLM1_60_b1_redo_sep16_scaffold_384_28
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34009..34341)
DNA (333bp) protein (111aa)
Transposase Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VUQ6_9ACTO
transposase
Transposase {ECO:0000313|EMBL:AGZ40718.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
PLM1_60_b1_redo_sep16_scaffold_384_29
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34440..34847)
DNA (408bp) protein (136aa)
hypothetical protein Tax=Salinispora pacifica RepID=UPI00037938B6
transposase
Transposase {ECO:0000313|EMBL:EFL19497.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
PLM1_60_b1_redo_sep16_scaffold_384_30
Mycobacterium sp. MAC_080597_8934, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34921..35058)
DNA (138bp) protein (46aa)
Endonuclease DDE Tax=Mycobacterium avium 05-4293 RepID=V7JAK6_MYCAV
Integrase core domain protein {ECO:0000313|EMBL:ETZ66434.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium sp. MAC_080597_8934.;"
putative transposase
Displaying 30 items

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