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PLM1_60_b1_redo_sep16_scaffold_416

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_416_1
Actinomyces urogenitalis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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358..2928
DNA (2571bp) protein (857aa)
DEAD/DEAH box helicase Tax=Streptomyces sp. AA1529 RepID=UPI00035DBAD3
Putative DEAH-box helicase {ECO:0000313|EMBL:EEH66472.1}; species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces urogenitalis DSM 15434.;"
DEAD/DEAH box helicase
PLM1_60_b1_redo_sep16_scaffold_416_2
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3001..3486
DNA (486bp) protein (162aa)
TIGR00725 family protein Tax=Frankia sp. QA3 RepID=I9A0Z4_9ACTO
TIGR00725 family protein {ECO:0000313|EMBL:EIV93016.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_416_3
unknown

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3599..4258
DNA (660bp) protein (220aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_416_4
Eimeria mitis, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(4929..5363)
DNA (435bp) protein (145aa)
hypothetical protein Tax=Nocardiopsis potens RepID=UPI00034D5DCB
Uncharacterized protein {ECO:0000313|EMBL:CDJ34128.1}; species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria mitis.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_416_5
unknown

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comp(5366..5557)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_416_6
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(5638..6192)
DNA (555bp) protein (185aa)
Putative type II secretion system protein F Tax=Ilumatobacter coccineus YM16-304 RepID=M4ZVH9_9ACTN
gspF; putative type II secretion system protein F
Tax=RBG_16_Chloroflexi_68_14_curated
PLM1_60_b1_redo_sep16_scaffold_416_7
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6444..7208)
DNA (765bp) protein (255aa)
Type II secretion system protein Tax=Pusillimonas sp. (strain T7-7) RepID=F4GU65_PUSST
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:AEC19854.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
PLM1_60_b1_redo_sep16_scaffold_416_8
RBG_16_Actinobacteria_68_21_curated, Acidimicrobiia, Actinobacteria, Bacteria

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comp(7205..8638)
DNA (1434bp) protein (478aa)
Type II secretion system protein E Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2S773_GEOOG
type II secretion system protein E
Tax=RBG_16_Actinobacteria_68_21_curated
PLM1_60_b1_redo_sep16_scaffold_416_9
unknown

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comp(8761..9891)
DNA (1131bp) protein (377aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_416_10
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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10468..12429
DNA (1962bp) protein (654aa)
Acetyl-coenzyme A synthetase Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFU2_THET1
acetate/CoA ligase
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_60_b1_redo_sep16_scaffold_416_11
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

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12739..13956
DNA (1218bp) protein (406aa)
fabD; malonyl CoA-acyl carrier protein transacylase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase Tax=Ilumatobacter coccineus YM16-304 RepID=M5A0S8_9ACTN
Malonyl CoA-acyl carrier protein transacylase {ECO:0000313|EMBL:KGA11233.1}; species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
PLM1_60_b1_redo_sep16_scaffold_416_12
Phascolarctobacterium sp. CAG:207, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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14166..15284
DNA (1119bp) protein (373aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:207.;"
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 Tax=Phascolarctobacterium sp. CAG:207 RepID=R6I782_9FIRM
PLM1_60_b1_redo_sep16_scaffold_416_13
Thermanaerovibrio acidaminovorans, Thermanaerovibrio, Synergistales, Synergistia, Synergistetes, Bacteria

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15281..16108
DNA (828bp) protein (276aa)
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 / Su883) RepID=D1B5N8_THEAS
3-oxoacyl-ACP reductase
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ACZ19329.1}; species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermanaerovibrio.;" source="Thermanaerovibrio acidaminovorans (strain ATCC 49978 / DSM 6589 /; Su883) (Selenomonas acidaminovorans).;"
PLM1_60_b1_redo_sep16_scaffold_416_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

16186..16446
DNA (261bp) protein (87aa)
Acyl carrier protein Tax=Clostridiales genomosp. BVAB3 (strain UPII9-5) RepID=D3R1A2_CLOB3
acpP; acyl carrier protein
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_60_b1_redo_sep16_scaffold_416_15
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16450..17688
DNA (1239bp) protein (413aa)
3-oxoacyl-(acyl-carrier-protein) synthase II (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; Flags: Precursor;; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SJD6_THEM7
PLM1_60_b1_redo_sep16_scaffold_416_16
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17751..18479
DNA (729bp) protein (243aa)
Putative uncharacterized protein Tax=Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS 134) RepID=D5UHX9_CELFN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG73403.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
PLM1_60_b1_redo_sep16_scaffold_416_17
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18412..19548)
DNA (1137bp) protein (379aa)
hypothetical protein Tax=Frankia sp. BMG5.12 RepID=UPI00037E83C3
D-alanyl-D-alanine carboxypeptidase
D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:BAD41360.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiobacterium thermophilum (strain T / IAM 14863).;"
PLM1_60_b1_redo_sep16_scaffold_416_18
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20195..21952
DNA (1758bp) protein (586aa)
von Willebrand factor type A Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y6H0_THEBD
von Willebrand factor type A
von Willebrand factor type A {ECO:0000313|EMBL:ADG87542.1}; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
PLM1_60_b1_redo_sep16_scaffold_416_19
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22233..23636
DNA (1404bp) protein (468aa)
Uncharacterized protein Tax=Amycolatopsis mediterranei RepID=G0G6Y2_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK38652.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_60_b1_redo_sep16_scaffold_416_20
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23873..25717
DNA (1845bp) protein (615aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AQG2_STRRD
von Willebrand factor A {ECO:0000313|EMBL:ETK33588.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_416_21
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25778..26536
DNA (759bp) protein (253aa)
Uncharacterized protein Tax=Amycolatopsis mediterranei RepID=G0G6Y2_AMYMS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEK38652.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_60_b1_redo_sep16_scaffold_416_22
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26566..27549
DNA (984bp) protein (328aa)
Phage shock protein A (IM30) suppresses sigma54-dependent transcription-like protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AQG0_STRRD
Phage shock protein A (IM30) suppresses sigma54-dependent transcription-like protein
Phage shock protein A (IM30) suppresses sigma54-dependent transcription-like protein {ECO:0000313|EMBL:ACZ84504.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
PLM1_60_b1_redo_sep16_scaffold_416_23
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27834..29189)
DNA (1356bp) protein (452aa)
aminotransferase Tax=Streptomyces sp. CNT302 RepID=UPI00037AF4FC
Aminotransferase {ECO:0000313|EMBL:ETK31675.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
aminotransferase
PLM1_60_b1_redo_sep16_scaffold_416_trna_1
unknown

Not on your lists

29294..29384
DNA (91bp)
transferRNA SeC(p)
PLM1_60_b1_redo_sep16_scaffold_416_24
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

29498..30655
DNA (1158bp) protein (386aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI0003800EF6
Putative prophage phiRv2 integrase {ECO:0000313|EMBL:KJF15997.1}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
integrase protein
PLM1_60_b1_redo_sep16_scaffold_416_25
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30723..31316
DNA (594bp) protein (198aa)
hypothetical protein Tax=Actinomadura atramentaria RepID=UPI00036029A7
flavoprotein
Flavoprotein {ECO:0000313|EMBL:ADP80533.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_60_b1_redo_sep16_scaffold_416_26
Actinopolyspora erythraea, Actinopolyspora, Actinopolysporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31313..32566
DNA (1254bp) protein (418aa)
XRE family transcriptional regulator Tax=Actinopolyspora halophila RepID=UPI000365F158
XRE family transcriptional regulator {ECO:0000313|EMBL:KGI80232.1}; species="Bacteria; Actinobacteria; Actinopolysporales; Actinopolysporaceae; Actinopolyspora.;" source="Actinopolyspora erythraea.;"
XRE family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_416_27
unknown

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comp(32582..33364)
DNA (783bp) protein (261aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_416_28
unknown

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33859..33936
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 29 items

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