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PLM1_60_b1_redo_sep16_scaffold_1322

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1322_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..639
DNA (639bp) protein (213aa)
Oxidoreductase Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMT2_9EURY
Oxidoreductase {ECO:0000313|EMBL:EMA46683.1}; species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
Zn-binding oxidoreductase
PLM1_60_b1_redo_sep16_scaffold_1322_2
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(863..1201)
DNA (339bp) protein (113aa)
Putative GCN5-related N-acetyltransferase Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H6Z4_ACTM4
putative GCN5-related N-acetyltransferase
Putative GCN5-related N-acetyltransferase {ECO:0000313|EMBL:BAL88781.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
PLM1_60_b1_redo_sep16_scaffold_1322_3
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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1402..1707
DNA (306bp) protein (102aa)
ArsR family transcriptional regulator Tax=Amycolatopsis mediterranei RepID=D8I0S6_AMYMU
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AEK39264.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
PLM1_60_b1_redo_sep16_scaffold_1322_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1679..2689)
DNA (1011bp) protein (337aa)
Uncharacterized protein Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVA4_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23168.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
PLM1_60_b1_redo_sep16_scaffold_1322_5
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(3516..4307)
DNA (792bp) protein (264aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003739E76
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
ABC-2 type transporter
PLM1_60_b1_redo_sep16_scaffold_1322_6
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(4304..5326)
DNA (1023bp) protein (341aa)
putative daunorubicin/doxorubicin resistance ATP-binding protein (EC:3.6.3.-)
ABC transporter Tax=Streptomyces violaceoniger RepID=UPI0003C775A7
ABC transporter {ECO:0000313|EMBL:KGM16154.1}; species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
PLM1_60_b1_redo_sep16_scaffold_1322_7
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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5421..5807
DNA (387bp) protein (129aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI00036E8F22
Putative transcriptional regulator {ECO:0000313|EMBL:EXG82474.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
PadR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1322_8
unknown

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6226..6762
DNA (537bp) protein (179aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1322_9
unknown

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comp(6856..7860)
DNA (1005bp) protein (335aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1322_10
Streptomyces glaucescens, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8110..10056)
DNA (1947bp) protein (649aa)
Putative ABC transporter ATP-binding protein Tax=Streptomyces afghaniensis 772 RepID=S4MMB6_9ACTO
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:AIS01963.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces glaucescens.;"
PLM1_60_b1_redo_sep16_scaffold_1322_11
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(10084..10740)
DNA (657bp) protein (219aa)
phenylalanyl-tRNA synthetase, alpha subunit (EC:6.1.1.20)
Phenylalanyl-tRNA synthetase, alpha subunit {ECO:0000313|EMBL:AHH97145.1}; EC=6.1.1.20 {ECO:0000313|EMBL:AHH97145.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
hypothetical protein Tax=Amycolatopsis nigrescens RepID=UPI000366BA8C
PLM1_60_b1_redo_sep16_scaffold_1322_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(11137..11493)
DNA (357bp) protein (119aa)
Transcriptional regulator, ArsR family Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGV9_THET1
ArsR family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
PLM1_60_b1_redo_sep16_scaffold_1322_13
unknown

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comp(11531..11785)
DNA (255bp) protein (85aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1322_14

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11995..12198
DNA (204bp) protein (68aa)
Uncharacterized protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGW5_THET1
Uncharacterized protein {ECO:0000313|EMBL:KKN10446.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1322_15

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12202..12684
DNA (483bp) protein (161aa)
CBS domain containing protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CGW6_THET1
Uncharacterized protein {ECO:0000313|EMBL:KKN10447.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1322_16
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(13013..13693)
DNA (681bp) protein (227aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
hypothetical protein Tax=Nonomuraea coxensis RepID=UPI0003705395
periplasmic sensor signal transduction histidine kinase
PLM1_60_b1_redo_sep16_scaffold_1322_17
unknown

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comp(13805..13975)
DNA (171bp) protein (57aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1322_18
unknown

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14700..14888
DNA (189bp) protein (63aa)
PLM1_60_b1_redo_sep16_scaffold_1322_19
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(15057..16037)
DNA (981bp) protein (327aa)
NADPH:quinone reductase Tax=Microbacterium maritypicum MF109 RepID=T5KKJ7_9MICO
NADPH:quinone reductase {ECO:0000313|EMBL:EQM75796.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
oxidoreductase
PLM1_60_b1_redo_sep16_scaffold_1322_20

Not on your lists

16657..16998
DNA (342bp) protein (114aa)
Isrso5-transposase protein Tax=mine drainage metagenome RepID=T1BN56_9ZZZZ
Isrso5-transposase protein {ECO:0000313|EMBL:EQD71212.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1322_21
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(17071..17637)
DNA (567bp) protein (189aa)
Putative A-factor receptor protein Tax=Streptomyces aurantiacus JA 4570 RepID=S3ZDT7_9ACTO
Putative A-factor receptor protein {ECO:0000313|EMBL:EPH41846.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
TetR family transcriptional regulator
PLM1_60_b1_redo_sep16_scaffold_1322_22
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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17782..18333
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Mycobacterium smegmatis JS623 RepID=L0IWL2_MYCSM
Protein of unknown function (DUF2867)
Uncharacterized protein {ECO:0000313|EMBL:AGB23710.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
PLM1_60_b1_redo_sep16_scaffold_1322_23
unknown

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18330..18557
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying 23 items

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