ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_1631

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_1631_1
unknown

Not on your lists

179..421
DNA (243bp) protein (81aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1631_2
unknown

Not on your lists

418..972
DNA (555bp) protein (185aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1631_3
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

1042..1281
DNA (240bp) protein (80aa)
Single-stranded DNA-binding protein Tax=Thermobifida fusca RepID=Q47K95_THEFY
single-stranded DNA-binding protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM1_60_b1_redo_sep16_scaffold_1631_4
Mycobacterium avium, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1506..2552
DNA (1047bp) protein (349aa)
Integrase Tax=Mycobacterium paratuberculosis RepID=V7JJL8_MYCPC
integrase
Integrase {ECO:0000313|EMBL:ETB00054.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium avium subsp. paratuberculosis 10-5864.;"
PLM1_60_b1_redo_sep16_scaffold_1631_5
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2553..2927
DNA (375bp) protein (125aa)
Putative transcriptional regulator, XRE family Tax=Frankia sp. (strain EAN1pec) RepID=A8LB46_FRASN
XRE family transcriptional regulator
Putative transcriptional regulator, XRE family {ECO:0000313|EMBL:ABW09507.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_60_b1_redo_sep16_scaffold_1631_6
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3116..5704
DNA (2589bp) protein (863aa)
Uncharacterized protein Tax=Frankia sp. CN3 RepID=G6H368_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EPD65709.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1631_7
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5835..6050)
DNA (216bp) protein (72aa)
ATP-dependent protease Tax=Hippea alviniae RepID=UPI0003B77D2E
clpX; ATP-dependent protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000255|HAMAP-Rule:MF_00175}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG; 5710 / VKM B-1787).;"
PLM1_60_b1_redo_sep16_scaffold_1631_8
Ferrimicrobium acidiphilum, Ferrimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

6279..6464
DNA (186bp) protein (62aa)
Single-stranded DNA-binding protein Tax=Segniliparus rugosus ATCC BAA-974 RepID=E5XQB4_9ACTO
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Ferrimicrobium.;" source="Ferrimicrobium acidiphilum DSM 19497.;"
single-strand binding protein
PLM1_60_b1_redo_sep16_scaffold_1631_9
unknown

Not on your lists

6540..6716
DNA (177bp) protein (59aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1631_10
unknown

Not on your lists

6713..6979
DNA (267bp) protein (89aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1631_11
unknown

Not on your lists

6976..7671
DNA (696bp) protein (232aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1631_12
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7931..8347
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Microbacterium laevaniformans OR221 RepID=H8E8P0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAM46116.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1631_13
Eimeria acervulina, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

8331..9491
DNA (1161bp) protein (387aa)
Uncharacterized protein Tax=Eimeria acervulina RepID=U6GFC8_EIMAC
Uncharacterized protein {ECO:0000313|EMBL:CDI78961.1}; species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria acervulina (Coccidian parasite).;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_1631_14
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10064..10663)
DNA (600bp) protein (200aa)
Uncharacterized protein Tax=Frankia sp. (strain EuI1c) RepID=E3JB56_FRASU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP84677.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
PLM1_60_b1_redo_sep16_scaffold_1631_15
unknown

Not on your lists

10887..11174
DNA (288bp) protein (96aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1631_16
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11365..12843
DNA (1479bp) protein (493aa)
Uncharacterized protein Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RAN5_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK21295.1}; species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC; 14739 / NCIMB 2177 / R-4) (Halobacterium mediterranei).;"
PLM1_60_b1_redo_sep16_scaffold_1631_17
unknown

Not on your lists

13587..15458
DNA (1872bp) protein (624aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_1631_18
Amycolatopsis orientalis, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15409..16632
DNA (1224bp) protein (408aa)
Uncharacterized protein Tax=Amycolatopsis orientalis HCCB10007 RepID=R4SUQ1_AMYOR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGM07104.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis orientalis HCCB10007.;"
Displaying 18 items

View Taxonomy