ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_36_20

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(19267..21285)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase (EC:2.3.1.182) similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 461.0
  • Bit_score: 499
  • Evalue 1.30e-138
2-isopropylmalate synthase/homocitrate synthase family protein {ECO:0000313|EMBL:AEH11018.1}; EC=2.3.1.182 {ECO:0000313|EMBL:AEH11018.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 461.0
  • Bit_score: 499
  • Evalue 6.30e-138
hypothetical protein Tax=Streptomyces sp. PsTaAH-124 RepID=UPI00036B627A similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 618.0
  • Bit_score: 507
  • Evalue 1.30e-140

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia symbiont of Datisca glomerata → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2019
GTGACCTTCGACGTCCCCAACACCAACACCAACACCAACACCGGCACCGATGCCGATGCCGATACCGACACCAAGACCGACACCGACACCAAGACCGACACCGACACCAAGACCAACACCGACACCAAGACCAACACCGACGACACCAACACCACCAACACCACCAACACCGGCACCAACATCACCGGCACCGAGCGGCTGCGCCTGAAGCGCGACAGGCCGCGTTCCGTACCGGCGCCCGCCCGGGACCCCGAGCGGGTGGAGACCTACGACACGACCCTGCGCGACGGCTCCCAGCAGGTCGGGCTCAGCTTCACCGTGGCCGACAAGCTGCGCGTCACCCAGCTCCTCGACGACCTCGGCGTCGACGTCATCGAAGGGGGGTGGCCGGGCTCCAACCCCAAGGACGCCGAGTACTTCGCGCGCGTGCGCGACCTGCCCCTGCGCCACGCGGTGCTGTCGGCCTTCGGCGCGACCCGCCGGCCCGGGCGGGGCACCGACGACGACCCCAACCTGCTGGCCCTGCTCGACTCGGGCGCGCCCGTGGTCGCGCTGGTCGGCAAGTCGTGGACCCTGCACGTCACCGAGGCGCTGCGGACCACCCTGGACGAGAACCTGGCCATGGTCGCCGACTCGGTCGCGCTCATGGCCGCCGAGGGGCGCCGGGTCGTGTTCGACGCCGAGCACTTCTTCGACGGGTGGGCCGCCGACCCCGCCTACGCGCTGGCGGTGGTGCGGGCCGCCGCCGAGGCCGGCGCGGACACGGTCGTCCTGTGCGACACCAACGGCGGCACCCTGCCGACCACCGTCGCCCAGGTGGTCGGGGAGGTCGCCCGCGCCCTCTCGTGGGTCCGCATCGGCGGGCACTTCCACGACGACGCGGCCTGCGCCGTTGCCAACTCCCTGGTCGCGGTCGCCGGCGGGGCCCGCCACGTCCAGGGTGCCGCCAACGGCTATGGGGAGCGGTGCGGCAACGCCGACCTGTTCGCGGTGGTGGCCGGGCTGGAGCTCAAGGAGGGGCGCAAGGTGCTGCCGCCGGGCCGGCTGGCCGCGCTCACCACCACCGCCCACGCCATCGCCGAGCTGGCCAACTTCGTGCCCGACGCCCGCCAGGCCTACGCCGGCTCGTCAGCCTTCGCGACCAAGGCCGGCCTGCACGCCTCCGCGATCGCCCGGCGGCCCGACGCCTACTCCCACGTCGACCCGGCCGCGGTCGGCAACCGCATGCGGGTCCTGGTCAGCGAGCTCGCCGGGCGGAGCAACGTGCTGGCCAAGGCGGGGGAGCTCGGGCTCGACCTCGAGGCCGACACCGCCCTGGGCGCCCGGGTGCTCGACCGGGTCAAGGAGCTGGAGCACCGCGGCTACACGTTCGAGATCGCCGACGCCTCCTTCGAGCTGCTCGTCCGGCGCGAGGCGGGCCAGCTCCAACCGCCGTTCGAGCTCGAGGGCTACCGGGTCCTGGTCGAGCGCCGCCCCGACGGCACCGACGTGAGCGAGGCGACCGTCCGGCTGCTCCTCCCTGACGGGGAAGCTCATCTCGAGCCTCCCGGCCCCCCCGCCGCGGACCGGGGAGCCAACCTCGAGCCTCCCGGCCCGCCTGTCCTTGACCGGGGGGCTGACCGTGAGCCCCCCGAACCCACTGTCGTCGACCAGGGGGCCAACCTCAAGCCCTCCGGTCCCCCCGTCGGGGACCGCCGTACCGTGGCGGTGGGGGAGGGGGTCGGGCCGGTCCACGCCCTGGACCAGGCCCTGCGCCGCGCGCTGGCCGACGACCACCCCGAGCTGGAAGGCGTCCACCTGGTCGACTACAAGGTGCGCATCCTCGACGGGCGGGCCGGCACCAAGGCGGTGACCCGGGTGCTCATCACCTCGGCCGACGCGGCCGGGGAGTGGACCACGGTGGGCGTCTCCGACGACATCGTCACCGCCTCCTGGGAGGCCCTGGCCGACGGCATCCTCTACTTCCTGGGCGTCCGCCTCCCCGCCCTCCAACCGCGGCTGGAGATCGCAGCGTCTTGA
PROTEIN sequence
Length: 673
VTFDVPNTNTNTNTGTDADADTDTKTDTDTKTDTDTKTNTDTKTNTDDTNTTNTTNTGTNITGTERLRLKRDRPRSVPAPARDPERVETYDTTLRDGSQQVGLSFTVADKLRVTQLLDDLGVDVIEGGWPGSNPKDAEYFARVRDLPLRHAVLSAFGATRRPGRGTDDDPNLLALLDSGAPVVALVGKSWTLHVTEALRTTLDENLAMVADSVALMAAEGRRVVFDAEHFFDGWAADPAYALAVVRAAAEAGADTVVLCDTNGGTLPTTVAQVVGEVARALSWVRIGGHFHDDAACAVANSLVAVAGGARHVQGAANGYGERCGNADLFAVVAGLELKEGRKVLPPGRLAALTTTAHAIAELANFVPDARQAYAGSSAFATKAGLHASAIARRPDAYSHVDPAAVGNRMRVLVSELAGRSNVLAKAGELGLDLEADTALGARVLDRVKELEHRGYTFEIADASFELLVRREAGQLQPPFELEGYRVLVERRPDGTDVSEATVRLLLPDGEAHLEPPGPPAADRGANLEPPGPPVLDRGADREPPEPTVVDQGANLKPSGPPVGDRRTVAVGEGVGPVHALDQALRRALADDHPELEGVHLVDYKVRILDGRAGTKAVTRVLITSADAAGEWTTVGVSDDIVTASWEALADGILYFLGVRLPALQPRLEIAAS*