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PLM1_60_b1_redo_sep16_scaffold_36

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_36_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1109
DNA (1107bp) protein (369aa)
Type III restriction protein res subunit bin=GWA2_Elusimicrobia_56_46 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
Helicase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_60_b1_redo_sep16_scaffold_36_trna_2
unknown

Not on your lists

comp(1115..1187)
DNA (73bp)
transferRNA Glu
PLM1_60_b1_redo_sep16_scaffold_36_trna_1
unknown

Not on your lists

comp(1201..1272)
DNA (72bp)
transferRNA Gln
PLM1_60_b1_redo_sep16_scaffold_36_2
actinobacterium SCGC AAA027-L06, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1335..2795)
DNA (1461bp) protein (487aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; species="Bacteria; Actinobacteria.;" source="actinobacterium SCGC AAA027-L06.;"
Glutamate--tRNA ligase Tax=actinobacterium SCGC AAA027-L06 RepID=J9H5A4_9ACTN
glutamyl-tRNA synthetase
PLM1_60_b1_redo_sep16_scaffold_36_3
Streptomyces leeuwenhoekii, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2913..3989
DNA (1077bp) protein (359aa)
glycosyltransferase Tax=Curtobacterium ginsengisoli RepID=UPI0003B32C07
Uncharacterized glycosyltransferase MJ1607 {ECO:0000313|EMBL:CQR60996.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces leeuwenhoekii.;"
glycosyltransferase
PLM1_60_b1_redo_sep16_scaffold_36_4
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4199..5263
DNA (1065bp) protein (355aa)
glycosyltransferase Tax=Curtobacterium ginsengisoli RepID=UPI0003B32C07
group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:ABK51915.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
PLM1_60_b1_redo_sep16_scaffold_36_5
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5435..6250)
DNA (816bp) protein (272aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconateDelta-isomerase {ECO:0000313|EMBL:ADG89505.1}; EC=5.3.3.10 {ECO:0000313|EMBL:ADG89505.1};; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
5-carboxymethyl-2-hydroxymuconateDelta-isomerase Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y689_THEBD
PLM1_60_b1_redo_sep16_scaffold_36_6
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6341..7000)
DNA (660bp) protein (220aa)
hypothetical protein Tax=Catelliglobosispora koreensis RepID=UPI00036BD39B
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:EXG81795.1}; species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
HAD family hydrolase
PLM1_60_b1_redo_sep16_scaffold_36_7
Lechevalieria aerocolonigenes, Lechevalieria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7031..8068)
DNA (1038bp) protein (346aa)
Putative naringenin-chalcone synthase Tax=Saccharomonospora glauca K62 RepID=I1D1S7_9PSEU
Chalcone synthase {ECO:0000313|EMBL:KJK46841.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Lechevalieria.;" source="Lechevalieria aerocolonigenes (Nocardia aerocolonigenes); (Saccharothrix aerocolonigenes).;"
chalcone and stilbene synthase domain-containing protein
PLM1_60_b1_redo_sep16_scaffold_36_8
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8065..8859)
DNA (795bp) protein (265aa)
Uncharacterized protein Tax=Spiribacter sp. UAH-SP71 RepID=U5T357_9GAMM
Methyltransferase {ECO:0000313|EMBL:EWC64606.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_36_9
Actinokineospora spheciospongiae, Actinokineospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8856..10076)
DNA (1221bp) protein (407aa)
Acyl-CoA dehydrogenase, short-chain specific {ECO:0000313|EMBL:EWC64604.1}; EC=1.3.8.1 {ECO:0000313|EMBL:EWC64604.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinokineospora.;" source="Actinokineospora spheciospongiae.;"
Acyl-CoA dehydrogenase domain protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLN7_9CHLR
acyl-CoA dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_36_10
unknown

Not on your lists

comp(10710..11153)
DNA (444bp) protein (148aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_36_11
unknown

Not on your lists

comp(11327..11719)
DNA (393bp) protein (131aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_36_12
Actinospica robiniae, Actinospica, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11847..12494
DNA (648bp) protein (216aa)
haloacid dehalogenase Tax=Patulibacter americanus RepID=UPI0003B67F34
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED {ECO:0000313|EMBL:ETA70994.1}; species="Bacteria; Actinobacteria; Catenulisporales; Actinospicaceae; Actinospica.;" source="Actinospica robiniae DSM 44927.;"
HAD-superfamily hydrolase
PLM1_60_b1_redo_sep16_scaffold_36_13
Streptomyces xiamenensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12709..13446
DNA (738bp) protein (246aa)
Methyltransferase type 11 Tax=Frankia sp. EUN1f RepID=D3D5Y3_9ACTO
Methyltransferase type 11 {ECO:0000313|EMBL:AKG46607.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces xiamenensis.;"
Methyltransferase type 11
PLM1_60_b1_redo_sep16_scaffold_36_14
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13574..14188
DNA (615bp) protein (205aa)
Uncharacterized protein Tax=Micromonospora lupini str. Lupac 08 RepID=I0L0R0_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CCH17407.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_36_15
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14278..15411)
DNA (1134bp) protein (378aa)
Membrane protein-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ATH7_RUBXD
hypothetical protein
Membrane protein-like protein {ECO:0000313|EMBL:ABG05301.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM1_60_b1_redo_sep16_scaffold_36_16
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15632..16876)
DNA (1245bp) protein (415aa)
L-threonine ammonia-lyase (EC:4.3.1.19)
L-threonine ammonia-lyase {ECO:0000313|EMBL:CCH86438.1}; EC=4.3.1.19 {ECO:0000313|EMBL:CCH86438.1};; species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
L-threonine ammonia-lyase Tax=Modestobacter marinus (strain BC501) RepID=I4ESS5_MODMB
PLM1_60_b1_redo_sep16_scaffold_36_17
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(17014..17619)
DNA (606bp) protein (202aa)
Glr1828 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NJK4_GLOVI
hypothetical protein
Glr1828 protein {ECO:0000313|EMBL:BAC89769.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
PLM1_60_b1_redo_sep16_scaffold_36_18
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(17766..18323)
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U0P3_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY88011.1}; species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203.;"
PLM1_60_b1_redo_sep16_scaffold_36_19
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18444..18992)
DNA (549bp) protein (183aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF06098.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
protein of unknown function UPF0150 bin=ACD48 species=ACD48 genus=ACD48 taxon_order=ACD48 taxon_class=ACD48 phylum=OP11 tax=ACD48 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
PLM1_60_b1_redo_sep16_scaffold_36_20
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19267..21285)
DNA (2019bp) protein (673aa)
2-isopropylmalate synthase (EC:2.3.1.182)
2-isopropylmalate synthase/homocitrate synthase family protein {ECO:0000313|EMBL:AEH11018.1}; EC=2.3.1.182 {ECO:0000313|EMBL:AEH11018.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
hypothetical protein Tax=Streptomyces sp. PsTaAH-124 RepID=UPI00036B627A
PLM1_60_b1_redo_sep16_scaffold_36_21
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21449..22369)
DNA (921bp) protein (307aa)
Branched-chain amino acid aminotransferase Tax=Frankia sp. CN3 RepID=G6HIP4_9ACTO
branched-chain amino acid aminotransferase
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:ABW10555.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM1_60_b1_redo_sep16_scaffold_36_22
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22436..23806)
DNA (1371bp) protein (457aa)
3-isopropylmalate dehydrogenase {ECO:0000313|EMBL:ADG89511.1}; EC=1.1.1.85 {ECO:0000313|EMBL:ADG89511.1};; species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;"
3-isopropylmalate dehydrogenase Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y695_THEBD
3-isopropylmalate dehydrogenase
PLM1_60_b1_redo_sep16_scaffold_36_23
unknown

Not on your lists

comp(23806..23994)
DNA (189bp) protein (63aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_36_24
Acidithrix ferrooxidans, Acidithrix, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(23991..25541)
DNA (1551bp) protein (517aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;"
2-isopropylmalate synthase Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=LEU1_ACIFD
2-isopropylmalate synthase
PLM1_60_b1_redo_sep16_scaffold_36_25
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25675..27300)
DNA (1626bp) protein (542aa)
serA; D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase (PGDH) {ECO:0000313|EMBL:CAJ64480.1}; EC=1.1.1.95 {ECO:0000313|EMBL:CAJ64480.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
D-3-phosphoglycerate dehydrogenase (PGDH) Tax=Frankia alni (strain ACN14a) RepID=Q0RDI9_FRAAA
PLM1_60_b1_redo_sep16_scaffold_36_26
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27310..28365)
DNA (1056bp) protein (352aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomeroreductase {ECO:0000256|HAMAP-Rule:MF_00435}; Alpha-keto-beta-hydroxylacyl reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
Ketol-acid reductoisomerase Tax=Cystobacter fuscus DSM 2262 RepID=S9R6E9_9DELT
ilvC; ketol-acid reductoisomerase
PLM1_60_b1_redo_sep16_scaffold_36_27
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28481..29002)
DNA (522bp) protein (174aa)
acetolactate synthase small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:AEH11038.1}; EC=2.2.1.6 {ECO:0000313|EMBL:AEH11038.1};; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
Acetolactate synthase, small subunit Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B516_FRADG
PLM1_60_b1_redo_sep16_scaffold_36_28
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29061..30857)
DNA (1797bp) protein (599aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
acetolactate synthase Tax=Sporichthya polymorpha RepID=UPI0003774E9E
acetolactate synthase 1 catalytic subunit
Displaying items 1-30 of 69 in total

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