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PLM1_60_b1_redo_sep16_scaffold_36_24

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(23991..25541)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidithrix.;" source="Acidithrix ferrooxidans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 501.0
  • Bit_score: 688
  • Evalue 5.60e-195
2-isopropylmalate synthase Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=LEU1_ACIFD similarity UNIREF
DB: UNIREF100
  • Identity: 66.4
  • Coverage: 512.0
  • Bit_score: 647
  • Evalue 6.00e-183
2-isopropylmalate synthase similarity KEGG
DB: KEGG
  • Identity: 66.4
  • Coverage: 512.0
  • Bit_score: 647
  • Evalue 1.70e-183

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Taxonomy

Acidithrix ferrooxidans → Acidithrix → Acidimicrobiales → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1551
GTGGCCGAGCGGATCACGATCTTCGACACGACCCTGAGGGACGGCGAGCAGTCCCCGGGCATCAACCTCAACGCCAAGGCGAAGCTGGAGATCGCCGAGCAGCTGGCACGGCTCGGCGTGGACGTCATCGAGGCCGGGTTCCCGGTCGCCAGCCAGGGCGACTTCGAGGCCGTGCGGGGCATCGCCCGCGCGGTCAAGGGGTCGACCGTGGCCGCGCTCTCGCGTACCCAGCGGGCCGACGTGGACCGCTGCTGGGAGGCGCTGCGCGACGCCCGGCACGCGCGCATCCACGTGTTCATCTCGACCAGCCCGAGCCACATGGAGCACATGCTCCGCATGACCCCGGCCCAGGTGGTGGCCGAGACCCGGGGCGGCGTGGGCCGGGCCCGGGAGCACACCGACGACGTCGAGTTCAGCCCCCAGGACGCCACCCGGACCCCGGTCGACTTCATGCTCGAGGTGCTGCAGACGGCGGTGGACGCCGGCGCCACCACCCTGAACATCCCCGACACGGTCGGCTACGGCATCCCCTGGGACTTCGGCACCCTCATCCGGCACGTACGCGAGCAGGTGGCCGGCGACTACGTGGTCTCCTGCCACTGCCACAACGACCTGGGCCTGGCCACCGCCAACTCGCTCGCGGCCGTGCAGGCCGGCGCCCGCCAGGTCGAGGTGTGCGTCAACGGCATCGGGGAGCGCGCCGGCAACGCCGCGCTCGAGGAGGTCGTGATGGCGCTGCGCATCCGCCCCGACCAGTTCCCCGGGGTGGAGACCGGCGTGCGCACCGAGGAGCTGGCCCGAGCCTCCCGGCTGGTGTCCCGCCTGACCGGCTACCCGGTGCAGTACAACAAGGCGGTCGTCGGCAAGAACGCGTTCGCCCACGAGTCCGGCATCCACCAGCACGGCGTGCTGGCCGACAAGGGCACCTACGAGATCATCGACGCCGCCGCCGTCGGCCAGGAGGGCAGCCAGATCGTGCTCGGCAAGCACTCCGGCCGCCACGCGGTCGACGACGCGCTGCGCCGGCTCGGGTTCGAGCTGGACCGTGAGGCGCTCGCCCGCGCCTTCGTCCGCTTCAAGGAGATGGCCGACCGCAAGACCCGCATCACCGACGTCGACCTCGAGGCGATCGTGGCCGACGAGGTCCTCGCCGACGAGGGGGCGTGGGGCTTCGTCGGCCTCCAGGTGGCCGGCGGCACGGTGATGTCGCCGACCGCGACGGTCCGGCTCAGCCACGACGGCGGGGTGGTCGAGGAGTCGGCCGTGGGCGACGGCATGGTCGACGCCGCCTGCGCCGCGATCGCCAAGGCGGTCGGGATCGACGCGATGCTGGTCGAGTTCCACGTCTCGGCCGTGACCGGGGGGACCGACGCCCTCGGGGACGTCACCGTGCAGGTCGAGACGCCAGCAGGGACCCGAGTAACCGGGCGCGGCGTGGCCACCGACATCGTGGAGGCCTCGGCGCGCGCCTACCTGCAGGCGGTGAACCGGCTCGCCCGCACCGCCCCGTCCCGCCCCGAACCGGTCAGCACCCAAGGAGTACCAGCATGA
PROTEIN sequence
Length: 517
VAERITIFDTTLRDGEQSPGINLNAKAKLEIAEQLARLGVDVIEAGFPVASQGDFEAVRGIARAVKGSTVAALSRTQRADVDRCWEALRDARHARIHVFISTSPSHMEHMLRMTPAQVVAETRGGVGRAREHTDDVEFSPQDATRTPVDFMLEVLQTAVDAGATTLNIPDTVGYGIPWDFGTLIRHVREQVAGDYVVSCHCHNDLGLATANSLAAVQAGARQVEVCVNGIGERAGNAALEEVVMALRIRPDQFPGVETGVRTEELARASRLVSRLTGYPVQYNKAVVGKNAFAHESGIHQHGVLADKGTYEIIDAAAVGQEGSQIVLGKHSGRHAVDDALRRLGFELDREALARAFVRFKEMADRKTRITDVDLEAIVADEVLADEGAWGFVGLQVAGGTVMSPTATVRLSHDGGVVEESAVGDGMVDAACAAIAKAVGIDAMLVEFHVSAVTGGTDALGDVTVQVETPAGTRVTGRGVATDIVEASARAYLQAVNRLARTAPSRPEPVSTQGVPA*