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PLM1_60_b1_redo_sep16_scaffold_39_30

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 26216..27055

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LWJ4_ACIC1 similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 259.0
  • Bit_score: 282
  • Evalue 3.60e-73
RNA polymerase subunit sigma 28 similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 259.0
  • Bit_score: 282
  • Evalue 1.00e-73
RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG {ECO:0000313|EMBL:ABK53804.1}; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 259.0
  • Bit_score: 282
  • Evalue 5.00e-73

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Taxonomy

Acidothermus cellulolyticus → Acidothermus → Acidothermales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 840
GTGCGCGACCACCTGCCGCTGGTGCGGCACGCCGTGGCGGAGGTGGCCAGCCGGGTCCCCCGGCACGTCTGCCGGGACGACCTGGAGTCAGCCGCCATGCTCGGCCTCGCGCAGGCGGCCCGCACCTACGACCCGGCCCGGGGCATCGCCTTCGAGCACCACGCCGGAAACCGCGTCCGGGGCGCGCTGCTCGACGCGCTGCGCGACTCGGACTGGGCCAGCCGATCGGTCCGGGCCCGCGCCCGCCAGATGCAGCGGGCCGCCGACGACCTGGCCGTGCGGCTCGGCCGCACCCCGAGCGTGCCCGAGGTCGCGGCCGAGCTCGGCATCGAGCCCGGGAGCGTGCACAAGCTGCTCGAGGACGTGCACCGGGCGACCGTCCTCAACTACGACTCGATCATGGCCGAGGGCGATGCCGGGGAGCTGCTCCCGGCCGACGCCGAAACCCCCGACCAGGTGCTGCTCGACCGCGAGCGCCTCGCCTACCTGGCCGACGCCGTGGTCGCCCTGCCCGAGCGGCTCCGCCTCGTGGTGACCGCCTACTTCCTCGAGGAGCGGCCGATGCTGGAGATCGCGGCCGAGCTGAGCGTGACCGAGTCGCGAGTCTCCCAGCTCCGTTCGGAGGCGCTCGTGCTGCTCAAGGACGGCCTGAACGCTCACCTCGACCCGGGTACCCTGCCCCCCGAGCCGCGGCCCGGCGGCCGGGTCGCGCGGCGAAAGGCCGCCTACTACGCGGCGGTCGCCGCCGGCTCCGACTACCGGACCCGCCTCGACGCGGCGCCCCCGCCCCTGCTGAGGCGGCCGGCGGGGCGGTCCCCCAGGGGACCCGCCTCGGCCTGA
PROTEIN sequence
Length: 280
VRDHLPLVRHAVAEVASRVPRHVCRDDLESAAMLGLAQAARTYDPARGIAFEHHAGNRVRGALLDALRDSDWASRSVRARARQMQRAADDLAVRLGRTPSVPEVAAELGIEPGSVHKLLEDVHRATVLNYDSIMAEGDAGELLPADAETPDQVLLDRERLAYLADAVVALPERLRLVVTAYFLEERPMLEIAAELSVTESRVSQLRSEALVLLKDGLNAHLDPGTLPPEPRPGGRVARRKAAYYAAVAAGSDYRTRLDAAPPPLLRRPAGRSPRGPASA*