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PLM1_60_b1_redo_sep16_scaffold_684_28

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 18499..19158

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulatory protein devR bin=bin9_gal15 species=Nocardiopsis alba genus=Nocardiopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin9_gal15 organism_group=GAL15 similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 220.0
  • Bit_score: 239
  • Evalue 2.10e-60
two-component system response regulator similarity KEGG
DB: KEGG
  • Identity: 56.7
  • Coverage: 215.0
  • Bit_score: 231
  • Evalue 1.20e-58
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 216.0
  • Bit_score: 350
  • Evalue 1.50e-93

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGGACGCGCCCCCGCTGCGGGTGATGCTGGTCGACGACCACGAGGTGGTCCGCGACGGCATCAAGGCGCTGCTGGCCGCCAGCGACGACGTCGTGGTGTGCGCCGAGGCCGCCAGCATGCGCCAGGCGGTCGCCGAGGCCGACCGGGCCCTGCCCGACGTGGTCGTGATGGACGTGCGCCTGTCGGACGGCTCGGGCATCGAGGCCACCCGCGACATCCGCGCGGCCCGCCCCAAGACCCAGGTGCTGATGCTGACCTCGTTCGCCGACGACGAGGCGCTCTACGCCTCGATCATGGCGGGCGCGGCCGGGTACGTGCTCAAGCAGATCCAGGGCGGCGAGCTGGTCCGCGCCATCCGGGCGGTCGGGGCGGGCCAGAGCCTGCTGGACCCGGCCGTGACCCGGGGGGTGCTGGACCGGCTGCGCAAGGGCAAGCATCTGCTGCGCGACGAGAAGCTGGCCCGGCTGTCGCCGCAGGAAGAGCGCATCCTGGGGCTGGTCGCCGACGGCAGGACCAACCGGCAGGTGGGCGAGGAGCTGGGCCTGGCCGAGAAGACGGTCAAGAACTACGTGTCCAGCATCCTGGCCAAGCTGGAGGTGGCCCGCCGGGCCGAGGCGGCCGCCTACCTGGCCCGCCACACCACCACCCCAGGCGCCTGA
PROTEIN sequence
Length: 220
MDAPPLRVMLVDDHEVVRDGIKALLAASDDVVVCAEAASMRQAVAEADRALPDVVVMDVRLSDGSGIEATRDIRAARPKTQVLMLTSFADDEALYASIMAGAAGYVLKQIQGGELVRAIRAVGAGQSLLDPAVTRGVLDRLRKGKHLLRDEKLARLSPQEERILGLVADGRTNRQVGEELGLAEKTVKNYVSSILAKLEVARRAEAAAYLARHTTTPGA*