ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_15_82

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 90405..91676

Top 3 Functional Annotations

Value Algorithm Source
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 419.0
  • Bit_score: 339
  • Evalue 5.20e-90
Diaminopimelate decarboxylase Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UIT9_MYXSD similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 419.0
  • Bit_score: 339
  • Evalue 3.70e-90
diaminopimelate decarboxylase similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 419.0
  • Bit_score: 339
  • Evalue 1.10e-90

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Myxococcus stipitatus → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1272
ATGAACGACCGCACCACCACCGGCCACGCCGGCGAGCCTTTCACCTATGCCCAAGGCGTGCTCCACGTCGGCGGGCTGCCGCTCGACCGGGTGGTGGCCGGGACCGGCACCCCCGCCTACGTGTACGACCTGGACGCGGTCGCGGCCGCGTTCCGCCGGGTGGCTGACGCGTTCGCGCCCATCGGCGGGCGCGTGCTGTACTCGGTGAAGGCCAACGCCAACCTCGCCCTGCTCGGCCGCCTGGCCGGGCTCGGAGCCGGCTTCGACGTGGTCGGCGGGGGCGAGCTGCTCCGCGTGCTGGAGGCGGGCGGCGAACCGGCCCGGGTGGTGTTCGCCGGGGTGGGCAAGACCTGGACCGAGCTGGCCCTGGCCGTCGAGCACGGCGTCGTCGTCCACGTCGAGTCGGCAGACGAGCTGGAGGCGCTGCAGGCGGTGGCGACGACGGCCCGGCGGCGGGCCCGGTTCGCGATCCGGGTCAACCCCGACGTCGAGGTCGACACCCACGTCCTGATCCAGACCGGGCACGACGAGGCCAAGTTCGGCGTGCCCGTCGCGCTGGCCCATGAGCTGCTCGGGCGGACCGCCAAGGGCGAGTACCCGTCCCTGGACCCGGTCGGGGTCCACGTCCACGTCGGCTCCCAGCTCCCCGACCCAGACGGCCTGGTCGCGGGGGCCCGCGTCGGCCTGGACGTCATCGAGACGGGCCGGGCGGCCGGGCTCGAGCTCTCCTGGCTCGACGTGGGCGGCGGGCTGCCGGTCGACTACGCGGGCGAGGGCGGTTCAGCCGGCCCCGAGGCGTTCGCGCGCTCGCTCGCCCCGGTGGTGGCCGGGCGCGACGTCCGGCTCGGCATCGAGCCCGGCCGGGCCCTGGTCGCGCGGGCGGGGGCGCTGGTCACCGCCGTGCTGTACCGCAAGCACCGCACGGCCGGCAGGATGCTGGTGGTCGACACCGGCATGCACCACCTGCTCCGCCCGGCCCTGTACGGCGCCAGGCACCGGTTCCTGCCCGTCCTGGCCGCGCCCACGGCCGGCCCGACCGAGGTGGTCGGGCCCGTGTGCGAGTCGACCGACGTGCTCGCGCCAGCCGCCGACCTGCCCGACCTCGAGCCCGGGGACCTGATGGCGATCCTCGACGCCGGCGCGTACGGGATGACGATGGCGTCCAACTACAACGGCCACCCCCGCCCGCCCGAGATCGTCGTGGAGGGCGGCACCGCCCGGGTCGCCCGCCGCCGCGAGACCTGGGAGGAGCAGCTCGCCTGGGAGCGGTGA
PROTEIN sequence
Length: 424
MNDRTTTGHAGEPFTYAQGVLHVGGLPLDRVVAGTGTPAYVYDLDAVAAAFRRVADAFAPIGGRVLYSVKANANLALLGRLAGLGAGFDVVGGGELLRVLEAGGEPARVVFAGVGKTWTELALAVEHGVVVHVESADELEALQAVATTARRRARFAIRVNPDVEVDTHVLIQTGHDEAKFGVPVALAHELLGRTAKGEYPSLDPVGVHVHVGSQLPDPDGLVAGARVGLDVIETGRAAGLELSWLDVGGGLPVDYAGEGGSAGPEAFARSLAPVVAGRDVRLGIEPGRALVARAGALVTAVLYRKHRTAGRMLVVDTGMHHLLRPALYGARHRFLPVLAAPTAGPTEVVGPVCESTDVLAPAADLPDLEPGDLMAILDAGAYGMTMASNYNGHPRPPEIVVEGGTARVARRRETWEEQLAWER*