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PLM1_60_b1_redo_sep16_scaffold_15_88

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: 97609..103644

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
YD repeat protein Tax=Frankia sp. EUN1f RepID=D3CYZ8_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 2080.0
  • Bit_score: 1247
  • Evalue 0.0
RHS repeat-associated core domain {ECO:0000313|EMBL:KJE21584.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.6
  • Coverage: 2019.0
  • Bit_score: 1263
  • Evalue 0.0
YD repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 40.6
  • Coverage: 2043.0
  • Bit_score: 1243
  • Evalue 0.0

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Taxonomy

Frankia sp. CpI1-S → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 6036
ATGTGTTGTGCTCGCATGCTCGCCGGCCTGCTCGCGCTCACGCTTGCTATGACGCTGTTGGAGGTGCCGCCAGCGCGGGCGGTACCGGTCAGCCCAGGGGTGGCGGCGGCGGCGGTGCCGGCCACGCCGAAGGCCGACGATTCACGCCGGCCCGACCGAGTAAGTGCCTTGCTGGCCGCCCGCCAGACCGGGCATCCGGTCGAGGTGACCGACCTGACCACCGAGACCTCACGGACGCTGGCCAACCCCGACGGGACGTTCACCGACGAGCTCAGTGACGGCCCGGTCCGCCTGGCCAGCAAGGACCCCCAGACCGGCGAGGTCACCTGGCAGGCCATGGACACCACCCTGGTCCAGGACGCCAGCGGCATCCACCCCAGGTTCACCAAGGTGGGGTTGCGGTTCTCCGAGGGTGGCACTGGGCCGCTGGTGCGGGTGACCAGCGGCGGGAAGTCGCTAGAGGTGGGGTTTGCCGGGGTGCGGCTGCCCGCGCCGACCCTGGACGGGCCGGTCGCCACCTACGCCGAGGTGCTGCCCGGCGTGGACTTGCGGTTGGAGGCGCTGCCGTTCGGCTACGACCAGCGGCTGATCGTCCGCGCCCGCCCGAAGGCCGCCCTGTCGTGGCGGTTCCCGCTCACCTTGGGTGGCGGGCTGTCGGCGACCAGGGATGCGGGTGGGCGGCTGGTGTTCTCCGCCGACGGCAAGCAGGTCGCCTCGGCTGACCCGCCGCAGATGTGGGGAGCGGGCAAGGACCCGGTGACCGGGCAGCCGGTCGACCGGGTCCCGGTCGCCACCACGGTCGCAGCCACCGCCGAGGGGCCGGAGTTGCAGCTCACCCCGGATCTGGGGTTTCTGACCGACCCGAACGTGGCGTTGCCGATCACCATCGACCCCTCACCCAACTTCGGCGCCATCGGCGACACCTACGTCGACAGTGGCGCGCCAACGACGTCGTTTTCGGCCGCTGTCGACATGCAGATCGGCAACCCGATCTCGGGGACCAGCAACCGGACCACCCGCACGCTGATCAAGTTCGACACCACCACCATCGCCGGCACCCACATCCTGGCCGCCACCTTGAAGCTGTGGCAGCTCGCCGCGGCCAGTTGCATCAACCGCGGGGTAGAGGTCAAGGCGGCCGGGGCCGCGTTCGACGGGGCCACGACCTGGAACACCAAACCGGCGGCCATCCCCACGGTGTACGCCTCGGCGACCGCGTCTGACACCTGCCCGGCCGGGTGGATGCAGATGGACCTGACCACCCTGACCGACCGGTGGGCGACCGGGGCGATCACCAACCACGGCGCCTACGTGGTGGTGCCCGCCGCCAACGAGAACAGCCACAACTACTGGCGGCAGTTCCGCTCCAACCAGGCCTCCGGGGCCGAGCACTCCACCTTGAGCGTGACCTACAACTCCATCCCGGCTGTCCCGGTGAGCCTGTACCCCGCGCCGGGGGCCAAGTTCGCCTCGCTGACCCCCGCGATCCGGGCCAAGTTCACCGACGCCGACGGCGGGGTCGGCCACAACGCCTACGAGCTGTACAACAACGCCACCGGCACCCTGGTCACCAGCGGCAACGGCGCCACCGTGGCGTCGGGGCAGCACTCGTTCTGGAACGTGGCGGCCGGCACGCTCAGCGACGGGGTGACCTACAAGTGGCGCGCCCGGGCCACCGACGGCACCGACACCTCACCGTGGACGGTGTTTGTCACCTTCACCACCGACATCACCCCACCGGGCGCCCCCGCCGTGGCGAGCTCCACCCATCCCAGCCAGACGACCTGGTACCCCGGCACCAACTTCTCGGCCTCCTGGCCCGCCGTCAGTGACGCCAGTGGACTGGCCGGCTACGGCGTGGTCTTAGACGACCAGGCCGGCACCGTCCCAAGCGTAGTTACCCAGACCACGACCACCTTCGCCAAGAACCCGATCCCGGTGGGGATCAGCTACCTGCACGTCCGCGCTCAGGACCAGGCCGGCAACTGGGGTCCCACCACCCACTTCACCATCCAGGTCCAAGGCGCCATCACCAGCATCAGCGACGGCGCCCGCACCCAGAAATACCTCACCCTCCAAGCCAAGGGCGACTCGACCTTTACCGGGGCGACCTTCCAGTTCCGCCGCGCCGACGCCGACCCGTGGACCACCATCCCCCTCACCAGTGGCAACGTCACCAACGGCGGGACCCCGGTCACCGCCTGGCCGGTCGCCATGACCGCCGGCGCGTCGCCGACGCTGGTGTGGAACCTGCCCGCCACCGCGGGGATCGACGCCGCCGACGGGCCCGTGCAGGTCCGCGCCAGCTTCACCGGCGGGCCGGGCGGCACCAGCCAGGTCGTCCACGCCACCTTGGACCAGAAGGCCTTCGGCGGCGACTACGCCAGTGAGGCCATCGGCCTGGGGTCGGTCAACCTGATCACCGGCAACTACTCGGTCGGCGCCACCGACGTGTCGATCGACAGCTACGGCTCCGACCTGACCGTGGCGCGCACGTTCAACTCCCGCGACCCCAACACCAGCTCTAACGGCCCGTTCGGACCAGGCTGGACGCCGTCGCTGACGGTCGAGGACGCCGCAGCGGACTACACCAGCCTCCACGACGCCGGCTCGTTCGTGGTGGTGACCAGCGAGGATGGCACGCAGCTGGCATTCGCCAAGCCGGCCGCGGGATCAACCTATATCCCTGAGGAGGACGCCACCGACCTGACGCTGACGACCGTGACAGGCGGGTTCAAGCTGGCCGATACCGACGGCAACACCACCACCTTCACCAAGCCGACCGGCGCGACCGACTACGTGCCCACTACGGTCGCCCAGCCAGGCAGCGCCACCACGACCACCTACACCTACCAGGTGACCGGCGGCGTCACCCGCATCACCCAGGCGCTCGCGCCCGTCCCCGCCGGCGTGACCTGCACCACGCTGGTGGCCGGCTGCCGCGCGCTCACCTTCACCCACGCCACGTCGACGACGGCGACCGGGACCAGCGAAGCCCAGTGGGGAGACTATTCGGGGCGGCTCAAGACGGTCAGCCTGACCGCCTACGACCCCGCCGCCAGCGCCATGGCCACCGTGGCGGTCGCGTCCTACCTGTACGACTCCACCGGGCGGCTCCGCGCCGTCTGGGACCCGCGGATCACCCCGGCATTGAAGACCCGCTATGCCTACGACGCCGGCGGGCACCTCCAGACGATCGCCCCGCCCGGGGAGAGCGCCTGGACGATCTCTTACGCGACCATCGCTGGTGATCCTGACACCGGCCGGCTCCGCTCGGTCTCGCGTCCCGCCATTCCCTCGGGGACCGCCACCACCACCGTCGCCTACGGCATCCCACTGTCGGGAGCGGGCGCGCCGTATGCGATGGGCGCGGGGGACGTGGCCGGCTGGGGGCAGGCCGACGTGCCGACCGACGCGACTGCGGTCTTCCCGCCCGACCAGGTCCCCGCCAGCCCGCCGGCCAGCTACACCCGCGCGACCGTGCACTACCTCAATCGGGACGGCCGCGAAGTCAACGAGGCGGACCCGGGCGGCCACATCTCGACGACGGAGTACGACGAGCACGGCAACACCGTCCGGGAGCTGTCGGCCACCAACCGGGCGCGGGCGCTCGCCACCGGCAGCACCACGGCCGAGCATGCCGAACGGGCCCGCCAGCTCGACACCCAGCGCGTCTACTCCACCGATGGCGTCGACCTGCTGGAGGAATGGGGGCCGCAGCACCTGGTCACGCTGGCCAGCGGCGACCAGGCCCAGGCCCGCCAGCACACCACCACCGCCTACGATGAGAGCGCCCCGACGGGTGGCCCCTACCACCTGGCTACCACGACCAAGGTCGGCGCCCGGGTTGTCGGGACAGCCAGCGACGTCGACGTGCGCACCACCACGACCGCCTACGACGGCCAGTCCAACCTGGGCTGGACGCTGCGCCAGCCCACCTCGGTCACCGTCGACGCGGTCACCGGCGGGCTGAACCTCAAGACCACCACCCTGTACGACGCCGCGACCGGGCTGGTCACCGAGACCCGCACGCCCGCGAACCCGGCCGGCGGCGACGCCCACGCCACCAAGACGATCTACTACACCGCCGGGACCAACCCCACCGACAGCGCCTGCGGGACCAAGCCCCAGTACGCCAACCTGGCCTGCAAGACCCTGCCCGCAGCCCAGCCGGGCACTGCTGGGCTGCCCGGCCTGCCGGTCACCCTGACCGTCTACAACCGCTACAACCAGCCCACCACCGTCACCGACACCGTCGGGGTCAGCACCCGGACCACCACCACCACCTACGACCCCGCCGGGCGGGTCACCGACGTGGCCGTCAGCTCCACCGTGGGGACCGCGCTGCCGAGCGTCCACACCGGCTACGACCCGGCCACGGGGCGGGCGACCACCACCCAGACCACCGAGGGTGCGGTCACCTCCACGGTCACCCGCGACTACGACGCGCTCGGCCGGCTGAGCGGCTACCACGACGCCGACACCAACAACGCCACCAGCAGCTACGACCTGCTCGACCGGCCCACCAGCAGCAACGACGGCAAGGGCACCCAAACCCTGACCTACGACACCGCCATCGACCCGCGCGGCCTGGTCACCAGCGTCGCCGACTCGGCCGCGGGCGCCTTCACCGCCCGCTACGACCCCGACGGGCAGCTCACCACCCAGGGCTACCCCAACGGCATGGAAGCCCGCCTCGCCTACGACGAGAGCGGCAGCGCGACCGGCCTGGCCTACGTCAAGACCAGCAACTGTTCGAGCAACTGCACCTGGCTCGGCTTCCAGGCCGACGAGTCCGTGCATGGGCAGCAGCTCACCCAGGCCGGCAGCCTGTCCAGCCAGATCCACAGCTACGACGCCGCGGGGCGGCTGAAGACCGTCCAGGACACCCCGGCCGGGGCCGGCTGCACCATCCGCGGCTACGGCTACGACGCCGACGCCAACCGCACCAGTCTGAACACCAAGCCACCGACCGCGGACGGCAGCTGCGACCCCACCGCGACCGGCACCACCATCACCCGTACCTACGATGCGGCCGACCGGATCATCGGCACCGGCTATGTCTACGACACCTTCGGGCGCATCACCGCCGTGCCCGCCGCCGACGCCGGTGGCAGCGCCCTTGCCGCCAGCTACTACACCAGCGACATGGTCCGCAGCCTCACCCAAGGCGCCACCACCCGGACCTGGACGCTCGACCCCAACCGCCGGCTGCGGGTACGCACCGACACCGGCGGCGCGACCGGGACCAGGACCAACCACTACGACAGCGACAGCGACTCGCCGGCCTGGATCGCCGAGAACGCCACCGCCTGGACGCGCAACATCGGCGGCGCCGACGGCGACCTGGCCGCCATCCAGGACTCGGCAAGCGGCACGACCCTGCAGCTTGCCAACCTTCACGGCGACGTTGTCGCCACCGCCAGCCTCGACCCCGCCGCCACCGGGCTCCTGTCCACCTTTGACGCCACCGAGTTCGGCATCCCCCGAGCCACTCCGAGTGCCCGCTACGGCTGGCTTGGCGACAAGCAACGCGAGACCGACTCGCTCACCGGCGTCGTCCTCATGGGCGTCCGGCTTTACGTGCCCACACTCGGCAGGTTCCTTCAAGTCGACCCCGTCCCAGGAGGCAGTGCTAACGACTACGACTACGCCAACCAAGATCCCATCAACACCTACGACCTCGACGGCCAGTGGGCCTGGCTCGTCCGCGCTGGCGCGGCCGCTGCTCGATGGGGTGCACGCTATGCTTGGCGAGCCGCCAGCTGGGTTGGACGCAGAACCTGGAGGGCAGCCAGATGGGCTGGACGGCAGGCCGCGAGGGGCTATAGGTGGGCACGGAGCTGGCGTGTCAGGACCGAGGTGCACGGTCCACATCACACATACTGGGGAAAGAGGAGGCCTCATATCTCAGTGACGTTCTATCGCCATCGTGTGAAGCGTAGTGATCGAAGGGTGCAAATTGGTCTTCCTTGGGGTCCTCTATGGAAGCGCGTGTACCGTCGCTTCTGGCCTCGAGCAGAAAAGTGGCACTAA
PROTEIN sequence
Length: 2012
MCCARMLAGLLALTLAMTLLEVPPARAVPVSPGVAAAAVPATPKADDSRRPDRVSALLAARQTGHPVEVTDLTTETSRTLANPDGTFTDELSDGPVRLASKDPQTGEVTWQAMDTTLVQDASGIHPRFTKVGLRFSEGGTGPLVRVTSGGKSLEVGFAGVRLPAPTLDGPVATYAEVLPGVDLRLEALPFGYDQRLIVRARPKAALSWRFPLTLGGGLSATRDAGGRLVFSADGKQVASADPPQMWGAGKDPVTGQPVDRVPVATTVAATAEGPELQLTPDLGFLTDPNVALPITIDPSPNFGAIGDTYVDSGAPTTSFSAAVDMQIGNPISGTSNRTTRTLIKFDTTTIAGTHILAATLKLWQLAAASCINRGVEVKAAGAAFDGATTWNTKPAAIPTVYASATASDTCPAGWMQMDLTTLTDRWATGAITNHGAYVVVPAANENSHNYWRQFRSNQASGAEHSTLSVTYNSIPAVPVSLYPAPGAKFASLTPAIRAKFTDADGGVGHNAYELYNNATGTLVTSGNGATVASGQHSFWNVAAGTLSDGVTYKWRARATDGTDTSPWTVFVTFTTDITPPGAPAVASSTHPSQTTWYPGTNFSASWPAVSDASGLAGYGVVLDDQAGTVPSVVTQTTTTFAKNPIPVGISYLHVRAQDQAGNWGPTTHFTIQVQGAITSISDGARTQKYLTLQAKGDSTFTGATFQFRRADADPWTTIPLTSGNVTNGGTPVTAWPVAMTAGASPTLVWNLPATAGIDAADGPVQVRASFTGGPGGTSQVVHATLDQKAFGGDYASEAIGLGSVNLITGNYSVGATDVSIDSYGSDLTVARTFNSRDPNTSSNGPFGPGWTPSLTVEDAAADYTSLHDAGSFVVVTSEDGTQLAFAKPAAGSTYIPEEDATDLTLTTVTGGFKLADTDGNTTTFTKPTGATDYVPTTVAQPGSATTTTYTYQVTGGVTRITQALAPVPAGVTCTTLVAGCRALTFTHATSTTATGTSEAQWGDYSGRLKTVSLTAYDPAASAMATVAVASYLYDSTGRLRAVWDPRITPALKTRYAYDAGGHLQTIAPPGESAWTISYATIAGDPDTGRLRSVSRPAIPSGTATTTVAYGIPLSGAGAPYAMGAGDVAGWGQADVPTDATAVFPPDQVPASPPASYTRATVHYLNRDGREVNEADPGGHISTTEYDEHGNTVRELSATNRARALATGSTTAEHAERARQLDTQRVYSTDGVDLLEEWGPQHLVTLASGDQAQARQHTTTAYDESAPTGGPYHLATTTKVGARVVGTASDVDVRTTTTAYDGQSNLGWTLRQPTSVTVDAVTGGLNLKTTTLYDAATGLVTETRTPANPAGGDAHATKTIYYTAGTNPTDSACGTKPQYANLACKTLPAAQPGTAGLPGLPVTLTVYNRYNQPTTVTDTVGVSTRTTTTTYDPAGRVTDVAVSSTVGTALPSVHTGYDPATGRATTTQTTEGAVTSTVTRDYDALGRLSGYHDADTNNATSSYDLLDRPTSSNDGKGTQTLTYDTAIDPRGLVTSVADSAAGAFTARYDPDGQLTTQGYPNGMEARLAYDESGSATGLAYVKTSNCSSNCTWLGFQADESVHGQQLTQAGSLSSQIHSYDAAGRLKTVQDTPAGAGCTIRGYGYDADANRTSLNTKPPTADGSCDPTATGTTITRTYDAADRIIGTGYVYDTFGRITAVPAADAGGSALAASYYTSDMVRSLTQGATTRTWTLDPNRRLRVRTDTGGATGTRTNHYDSDSDSPAWIAENATAWTRNIGGADGDLAAIQDSASGTTLQLANLHGDVVATASLDPAATGLLSTFDATEFGIPRATPSARYGWLGDKQRETDSLTGVVLMGVRLYVPTLGRFLQVDPVPGGSANDYDYANQDPINTYDLDGQWAWLVRAGAAAARWGARYAWRAASWVGRRTWRAARWAGRQAARGYRWARSWRVRTEVHGPHHTYWGKRRPHISVTFYRHRVKRSDRRVQIGLPWGPLWKRVYRRFWPRAEKWH*