ggKbase home page

PLM1_60_b1_redo_sep16_scaffold_1186_11

Organism: PLM1_60_b1_redo_sep16_Actinobacteridae_Actinomycetales_73_33

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 3 ASCG 13 / 38 MC: 1
Location: comp(9339..9500)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein Tax=Amycolatopsis alba RepID=UPI00036174CA similarity UNIREF
DB: UNIREF100
  • Identity: 84.4
  • Coverage: 45.0
  • Bit_score: 82
  • Evalue 7.90e-14
Cro/C1-type HTH DNA-binding domain protein {ECO:0000313|EMBL:ETZ30180.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium avium complex (MAC).;" source="Mycobacterium intracellulare MIN_052511_1280.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 45.0
  • Bit_score: 82
  • Evalue 1.40e-13
putative transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 45.0
  • Bit_score: 81
  • Evalue 6.50e-14

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium intracellulare → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 162
ATGCAGTGGAACCTTCGGCTTGCGACCGCCAACCGGGGCATCTGGAAGGCCAGCGAGCTGCAGCGCCTGCTCGCCGCGCGCGGGCTGGTCATCAGCGCGGGCAAGCTGTCGGGGCTGTGGTCGGGCACCCCAACGCCGTCAAGCTCGAGGAGCTGGACGTGA
PROTEIN sequence
Length: 54
MQWNLRLATANRGIWKASELQRLLAARGLVISAGKLSGLWSGTPTPSSSRSWT*