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PLM1_60_b1_redo_sep16_scaffold_2477

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_b1_redo_sep16_scaffold_2477_1
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

comp(3..362)
DNA (360bp) protein (120aa)
Uncharacterized protein involved in propionate catabolism (EC:4.2.1.79)
Uncharacterized protein involved in propionate catabolism {ECO:0000313|EMBL:CCW35513.1}; EC=4.2.1.79 {ECO:0000313|EMBL:CCW35513.1};; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
Uncharacterized protein involved in propionate catabolism Tax=Chthonomonas calidirosea T49 RepID=S0EUW8_9BACT
PLM1_60_b1_redo_sep16_scaffold_2477_2
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(379..1395)
DNA (1017bp) protein (339aa)
ABC-type Fe3+ transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
extracellular solute-binding protein
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM1_60_b1_redo_sep16_scaffold_2477_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1453..2820)
DNA (1368bp) protein (456aa)
MmgE/PrpD Tax=Achromobacter arsenitoxydans SY8 RepID=H0F0X4_9BURK
MmgE/PrpD family protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM1_60_b1_redo_sep16_scaffold_2477_4
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2841..3674)
DNA (834bp) protein (278aa)
Transcriptional regulator, IclR family Tax=Geobacillus sp. (strain C56-T3) RepID=D7D5N9_GEOSC
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:AEG14401.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
PLM1_60_b1_redo_sep16_scaffold_2477_5
Deinococcus proteolyticus, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(4195..5124)
DNA (930bp) protein (310aa)
Ppx/GppA phosphatase (EC:3.6.1.40)
Ppx/GppA phosphatase {ECO:0000313|EMBL:ADY25216.1}; EC=3.6.1.40 {ECO:0000313|EMBL:ADY25216.1};; species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 /; NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703).;"
Ppx/GppA phosphatase Tax=Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703) RepID=F0RIV7_DEIPM
PLM1_60_b1_redo_sep16_scaffold_2477_6
unknown

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5530..5709
DNA (180bp) protein (60aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2477_7
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5856..6128)
DNA (273bp) protein (91aa)
Glycosyl hydrolase BNR repeat Tax=uncultured marine group III euryarchaeote KM3-28-E8 RepID=B3V6K0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ETX01497.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM1_60_b1_redo_sep16_scaffold_2477_8
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6566..7540
DNA (975bp) protein (325aa)
Methyltransferase FkbM Tax=Magnetospirillum gryphiswaldense RepID=A4U1A0_9PROT
methyltransferase FkbM
Tax=RBG_16_Gammaproteobacteria_51_14_curated
PLM1_60_b1_redo_sep16_scaffold_2477_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7605..7835)
DNA (231bp) protein (77aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_60_b1_redo_sep16_scaffold_2477_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8348..9412
DNA (1065bp) protein (355aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_60_b1_redo_sep16_scaffold_2477_11
unknown

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9646..9861
DNA (216bp) protein (72aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2477_12
unknown

Not on your lists

9846..10184
DNA (339bp) protein (113aa)

This feature has no annotations

PLM1_60_b1_redo_sep16_scaffold_2477_13
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10213..11319
DNA (1107bp) protein (369aa)
ABC transporter, periplasmic substrate-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM1_60_b1_redo_sep16_scaffold_2477_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11369..12385
DNA (1017bp) protein (339aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Mycobacterium parascrofulaceum genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative TIM-barrel fold metal-dependent hydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_60_b1_redo_sep16_scaffold_2477_15
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12395..13054
DNA (660bp) protein (220aa)
id=2090298 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
Displaying 15 items

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