ggKbase home page

PLM1_60_coex_sep16_scaffold_5335

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_5335_1
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

1..501
DNA (501bp) protein (167aa)
hypothetical protein Tax=Meiothermus timidus RepID=UPI000377D6BB
Cytochrome P450 {ECO:0000313|EMBL:CDM66829.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Cytochrome P450
PLM1_60_coex_sep16_scaffold_5335_2
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1292..1693
DNA (402bp) protein (134aa)
Beta-xylanase {ECO:0000256|RuleBase:RU361174}; EC=3.2.1.8 {ECO:0000256|RuleBase:RU361174};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
Glycosyl hydrolase family 10 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A6N5_9PROT
beta-1,4-xylanase
PLM1_60_coex_sep16_scaffold_5335_3
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1910..3271
DNA (1362bp) protein (454aa)
Uncharacterized protein Tax=Methylobacterium sp. (strain 4-46) RepID=B0U9N9_METS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA17891.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
PLM1_60_coex_sep16_scaffold_5335_4
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

3281..5263
DNA (1983bp) protein (661aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00035E24A8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC83150.1}; species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
PLM1_60_coex_sep16_scaffold_5335_5
unknown

Not on your lists

comp(5336..5629)
DNA (294bp) protein (98aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_5335_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5656..5886)
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX01760.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Sulfitobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
selenoprotein
PLM1_60_coex_sep16_scaffold_5335_7
unknown

Not on your lists

comp(5931..6188)
DNA (258bp) protein (86aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_5335_8
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6208..7281)
DNA (1074bp) protein (358aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX01762.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
thiol-disulfide oxidoreductase domain-containing protein bin=bin7_NC10_sister species=Sulfitobacter sp. EE-36 genus=Sulfitobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
PLM1_60_coex_sep16_scaffold_5335_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7805..8164)
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) RepID=B1ZIY8_METPB
protein of unknown function UPF0118
Uncharacterized protein {ECO:0000313|EMBL:AHG89189.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM1_60_coex_sep16_scaffold_5335_10
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9406..9585)
DNA (180bp) protein (60aa)
Sigma54 specific transcriptional regulator, Fis family Tax=Stenotrophomonas maltophilia JV3 RepID=G0K0M3_STEMA
Fis family sigma-54 specific transcriptional regulator
Tax=GWD2_Desulfuromonadales_61_12_curated
Displaying 10 items

View Taxonomy