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PLM1_60_coex_sep16_scaffold_1864

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_1864_1
Methanosarcina sp. WH1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3..662)
DNA (660bp) protein (220aa)
Uncharacterized protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46A77_METBF
Pentapeptide repeat family protein {ECO:0000313|EMBL:AKB20917.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WH1.;"
hypothetical protein
PLM1_60_coex_sep16_scaffold_1864_2
unknown

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858..1103
DNA (246bp) protein (82aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_1864_3
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1103..1765
DNA (663bp) protein (221aa)
Major facilitator superfamily transporter Tax=Oceanibaculum indicum P24 RepID=K2IRP8_9PROT
Major facilitator superfamily transporter {ECO:0000313|EMBL:EKE72936.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
major facilitator superfamily transporter
PLM1_60_coex_sep16_scaffold_1864_4
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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1826..3142
DNA (1317bp) protein (439aa)
Transposase (IS4 family protein) Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QB33_DESAH
transposase family protein
Transposase (IS4 family protein) {ECO:0000313|EMBL:ACN14832.1}; Transposase family protein {ECO:0000313|EMBL:ACN16469.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2).;"
PLM1_60_coex_sep16_scaffold_1864_5
delta proteobacterium NaphS2, Deltaproteobacteria, Proteobacteria, Bacteria

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3191..3517
DNA (327bp) protein (109aa)
Uncharacterized protein Tax=delta proteobacterium NaphS2 RepID=D8FB39_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EFK07011.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria.;" source="delta proteobacterium NaphS2.;"
transposase (IS4 family protein)
PLM1_60_coex_sep16_scaffold_1864_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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3528..3734
DNA (207bp) protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX03633.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
PLM1_60_coex_sep16_scaffold_1864_7
unknown

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comp(4189..4968)
DNA (780bp) protein (260aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_1864_8
BJP_IG2069_Syntrophobacterales_47_18, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6601..7353)
DNA (753bp) protein (251aa)
hypothetical protein Tax=Gemmata obscuriglobus RepID=UPI00016C4222
hypothetical protein
Tax=BJP_IG2069_Syntrophobacterales_47_18
PLM1_60_coex_sep16_scaffold_1864_9
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7350..10562)
DNA (3213bp) protein (1071aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI00031B527E
type I restriction-modification system methyltransferase subunit
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
PLM1_60_coex_sep16_scaffold_1864_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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11134..12306
DNA (1173bp) protein (391aa)
Transposase, IS4 family protein/SWIM domain fusion bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Transposase, IS4 family protein/SWIM domain fusion
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_coex_sep16_scaffold_1864_11
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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12318..13433
DNA (1116bp) protein (372aa)
Transposase family protein Tax=Desulfobacter postgatei 2ac9 RepID=I5B4T8_9DELT
Transposase family protein {ECO:0000313|EMBL:EIM64501.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacter postgatei 2ac9.;"
transposase family protein
PLM1_60_coex_sep16_scaffold_1864_12
RBG_13_Chloroflexi_50_10_curated, Chloroflexi, Bacteria

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13452..13700
DNA (249bp) protein (83aa)
Transposase, IS4 family protein/SWIM domain fusion bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
transposase family protein
Tax=RBG_13_Chloroflexi_50_10_curated
PLM1_60_coex_sep16_scaffold_1864_13
unknown

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comp(14628..15044)
DNA (417bp) protein (139aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_1864_14
unknown

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comp(15269..15604)
DNA (336bp) protein (112aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_1864_15
Phycisphaera mikurensis, Phycisphaera, Phycisphaerales, Phycisphaerae, Planctomycetes, Bacteria

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comp(15604..17421)
DNA (1818bp) protein (606aa)
Uncharacterized protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IJJ9_PHYMF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAM05437.1}; species="Bacteria; Planctomycetes; Phycisphaerae; Phycisphaerales; Phycisphaeraceae; Phycisphaera.;" source="Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 /; FYK2301M01).;"
PLM1_60_coex_sep16_scaffold_1864_16
unknown

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comp(17679..17942)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_1864_17
unknown

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18128..18307
DNA (180bp) protein (60aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_1864_18
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18258..19253)
DNA (996bp) protein (332aa)
Uncharacterized protein Tax=Legionella pneumophila RepID=Q5X3B3_LEGPA
Integrase {ECO:0000313|EMBL:ETX08269.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
Displaying 18 items

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