ggKbase home page

PLM1_60_coex_sep16_scaffold_3081

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_3081_1

Not on your lists

2..1504
DNA (1503bp) protein (501aa)
Marine proteobacterial sortase target protein Tax=uncultured bacterium CSLF43 RepID=G4WW08_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN84831.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
uncharacterized protein containing a von Willebrand factor type A (vWA) domain
PLM1_60_coex_sep16_scaffold_3081_2
unknown

Not on your lists

1629..1904
DNA (276bp) protein (92aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_3081_3
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1949..2533)
DNA (585bp) protein (195aa)
aryldialkylphosphatase (EC:3.1.8.1)
UPI0003D01392 related cluster Tax=unknown RepID=UPI0003D01392
Putative hydrolase {ECO:0000313|EMBL:CDX14782.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
PLM1_60_coex_sep16_scaffold_3081_4
unknown

Not on your lists

comp(2758..2955)
DNA (198bp) protein (66aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_3081_5
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3088..4584
DNA (1497bp) protein (499aa)
hypothetical protein Tax=Methylomicrobium buryatense RepID=UPI0003463D8A
Response regulator containing CheY-like receiver, AAA-type ATPase and DNA-binding domains {ECO:0000313|EMBL:GAN33270.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
zraR; transcriptional regulatory protein zraR
PLM1_60_coex_sep16_scaffold_3081_6
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4858..5673
DNA (816bp) protein (272aa)
Peptidase C14 Tax=Youngiibacter fragilis 232.1 RepID=V7I697_9CLOT
Peptidase C14 {ECO:0000313|EMBL:ETA80821.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
peptidase C14 caspase catalytic subunit p20
PLM1_60_coex_sep16_scaffold_3081_7
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5725..8877
DNA (3153bp) protein (1051aa)
Peptidase M17 leucyl aminopeptidase domain protein Tax=Methylosinus trichosporium OB3b RepID=D5QU14_METTR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AII53774.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
PLM1_60_coex_sep16_scaffold_3081_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9123..9482
DNA (360bp) protein (120aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 8 items

View Taxonomy