ggKbase home page

PLM1_60_coex_sep16_scaffold_10370

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_10370_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3..749)
DNA (747bp) protein (249aa)
Enoyl-CoA hydratase/carnithine racemase bin=GWA2_Methylomirabilis_73_35 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fad-1; enoyl-CoA hydratase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_coex_sep16_scaffold_10370_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(767..1960)
DNA (1194bp) protein (398aa)
Peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NE70_DESAR
peptidase S11 D-alanyl-D-alanine carboxypeptidase 1
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM1_60_coex_sep16_scaffold_10370_3
unknown

Not on your lists

2238..2429
DNA (192bp) protein (64aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_10370_4
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2699..3439
DNA (741bp) protein (247aa)
Metallophosphoesterase Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKU0_HALO1
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACY16660.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM1_60_coex_sep16_scaffold_10370_5
unknown

Not on your lists

comp(3568..3804)
DNA (237bp) protein (79aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_10370_6
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4054..4569
DNA (516bp) protein (172aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
formylmethionine deformylase (EC:3.5.1.88)
Peptide deformylase bin=GWB2_Nitrospirae_rel_47_37 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
PLM1_60_coex_sep16_scaffold_10370_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4591..5508
DNA (918bp) protein (306aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase Tax=Thermosinus carboxydivorans Nor1 RepID=A1HMX6_9FIRM
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM1_60_coex_sep16_scaffold_10370_8
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

5505..6866
DNA (1362bp) protein (454aa)
N utilization substance protein B-like protein bin=GWC2_Nitrospirae_57_13 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
sun protein
Tax=GWC2_Nitrospirae_57_13_curated
PLM1_60_coex_sep16_scaffold_10370_9
unknown

Not on your lists

6916..7242
DNA (327bp) protein (109aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_10370_10
unknown

Not on your lists

7202..7552
DNA (351bp) protein (117aa)

This feature has no annotations

Displaying 10 items

View Taxonomy