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PLM1_60_coex_sep16_scaffold_4240_3

Organism: PLM1_60_coex_sep16_Tectomicrobia_59_6

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 12 / 38
Location: 1350..2015

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.3
  • Coverage: 206.0
  • Bit_score: 151
  • Evalue 1.40e-33
Transcription-repair-coupling factor Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E412_GEOLS similarity UNIREF
DB: UNIREF100
  • Identity: 40.9
  • Coverage: 208.0
  • Bit_score: 149
  • Evalue 2.20e-33
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 208.0
  • Bit_score: 149
  • Evalue 6.20e-34

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Taxonomy

Geobacter soli → Geobacter → Desulfuromonadales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGATGTCGATGACAATGCCCTCTCACGAATACTGGTCCCAGATTTCGACGCTTGCCCAGCGCCTGGCCAGCGGCGACGAGGTGATCCGCCTGGGTTATTTGGCCGGGGCCAGCAAAGCGCTGTTTTTGGCCAGTTTGTCCCATCAGCTCCGACGGCCGTTGGTCGTGATCACCCCCGCATCAACCGAAGCCGAAGCACTCGTCCAAGACCTCCGCTTTTTTACCTCCTCGACCTCTTCTCCACCGAAGATTGTGCTGTTCCCAGCCGAGGAGCATACACCGTACGAGCCAGCCTCGGAAACCTCTGAGCTTACGTCACAGCGCCTCATTGCCCTGCGGTCGATGCTCCAGTCGGCGCCACAGATCATCGTCACCACGCCACAGGCCATGATCCCCTACGTTATTCCCCGCGCACACCTCCAACAGAACGGCCTTGACCTCACACCTGGGATGACCATCGAGCGGCAAGACTTCATCAAGCGCCTGTTGCGGTGCGGCTATCACCAGGTAGATATGGTTGAGGAATGGGGGGATTTCGGCGTCCGTGGCGGGATTCTCGATCTGTTCCCGCCTCACCTCCCACGTCCCATCCGTCTGGAGTTCATGGGGGATGAGATCGAATCGCTGCGGGAGTTCGATCTCGCCACACAACGCTCCTTAGCGTGA
PROTEIN sequence
Length: 222
MMSMTMPSHEYWSQISTLAQRLASGDEVIRLGYLAGASKALFLASLSHQLRRPLVVITPASTEAEALVQDLRFFTSSTSSPPKIVLFPAEEHTPYEPASETSELTSQRLIALRSMLQSAPQIIVTTPQAMIPYVIPRAHLQQNGLDLTPGMTIERQDFIKRLLRCGYHQVDMVEEWGDFGVRGGILDLFPPHLPRPIRLEFMGDEIESLREFDLATQRSLA*