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PLM1_60_coex_sep16_scaffold_4240

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_4240_1
unknown

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2..217
DNA (216bp) protein (72aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_4240_2
R_Nitrospinae_39_10, Nitrospinae, Bacteria

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230..1087
DNA (858bp) protein (286aa)
PAS domain S-box protein (EC:2.7.13.3)
Multi-sensor signal transduction histidine kinase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
PLM1_60_coex_sep16_scaffold_4240_3
Geobacter soli, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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1350..2015
DNA (666bp) protein (222aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter soli.;"
Transcription-repair-coupling factor Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E412_GEOLS
transcription-repair coupling factor
PLM1_60_coex_sep16_scaffold_4240_4
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

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2101..4854
DNA (2754bp) protein (918aa)
Transcription-repair-coupling factor Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5E9U7_GEOBB
mfd; transcription-repair coupling factor
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
PLM1_60_coex_sep16_scaffold_4240_5
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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5025..6365
DNA (1341bp) protein (447aa)
Multidrug resistance efflux pump Tax=Microcoleus sp. PCC 7113 RepID=K9WA49_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:ETX03786.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
multidrug resistance efflux pump
PLM1_60_coex_sep16_scaffold_4240_6
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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6445..7353
DNA (909bp) protein (303aa)
Putative PpiC-type peptidyl-prolyl cis-trans isomerase Tax=Nitrospina gracilis 3/211 RepID=M1Z0E0_9BACT
PpiC-type peptidyl-prolyl cis-trans isomerase
Tax=RBG_13_Deltaproteobacteria_65_10_curated
PLM1_60_coex_sep16_scaffold_4240_7
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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7565..8125
DNA (561bp) protein (187aa)
pyrR; bifunctional pyrimidine operon regulatory protein/uracil phosphoribosyltransferase (EC:2.4.2.9) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase
Tax=S_Thermoanaerobacterales_50_218
PLM1_60_coex_sep16_scaffold_4240_8
R_NC10_66_22, NC10, Bacteria

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8156..8935
DNA (780bp) protein (260aa)
pyrB; aspartate carbamoyltransferase (catalytic subunit) (EC:2.1.3.2) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
pyrB; aspartate carbamoyltransferase (catalytic subunit) (EC:2.1.3.2)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM1_60_coex_sep16_scaffold_4240_9
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

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9000..10406
DNA (1407bp) protein (469aa)
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
PLM1_60_coex_sep16_scaffold_4240_10
R_Nitrospinae_39_10, Nitrospinae, Bacteria

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10403..11578
DNA (1176bp) protein (392aa)
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5)
Tax=RIFCSPLOWO2_01_FULL_Nitrospinae_39_10_curated
PLM1_60_coex_sep16_scaffold_4240_11
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

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11651..12118
DNA (468bp) protein (156aa)
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116, ECO:0000313|EMBL:CBE69192.1};; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
Carbamoyl-phosphate synthase large chain Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHG0_9BACT
Displaying 11 items

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