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PLM1_60_coex_sep16_scaffold_7284_13

Organism: PLM1_60_coex_sep16_Tectomicrobia_59_6

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 12 / 38
Location: 8957..9715

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD Tax=Geobacter RepID=A5G8S3_GEOUR similarity UNIREF
DB: UNIREF100
  • Identity: 43.6
  • Coverage: 234.0
  • Bit_score: 185
  • Evalue 4.10e-44
RpoD family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 234.0
  • Bit_score: 185
  • Evalue 1.20e-44
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.9
  • Coverage: 230.0
  • Bit_score: 186
  • Evalue 2.60e-44

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Taxonomy

RLO_Nitrospinae_39_16 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 759
ATGGCAAAACGAGGCAAAAGCTCGGACATGAAGATGTTGATCTCCATGGGGAAGGAGAAGGGCTACCTGACCTATGATGAGGTCAATGACATCTTGCCCCCGGATGTTGTCTCGCCGGAGCACATCGATGACCTGATGGTTCTCTTCGGCGAGATGGATATCGAACTGGTCGACGCGGACAATGGCGAATCCAACGTCGAGGTGATGAAGGTCGACGACAAAGAGCTACTCGAAGAGGAAAAATCGCTGGCTCTACGGGAAACGGGAGGCGGGCATACTGATGATCCCGTCCGTATGTACCTGCGCGAGATGGGTTCGATACCCTTGCTCACCCGAGAGGGCGAGGTCGAAATCGCCAAACGTATCGAGGACGCCCAAAATCGGATCATCATGGCCGTCATCAAAAACCCACTGGCCACCAAGGAAGTGCTCCATCTCCGAGACAAGCTTAAAAATGGCAAGCTAAGCCCAGATGAGCTTGGTGTGTCTGCCATGGCTGATGATGACGACGATGAGGTTGGATGGCGTGTCCAGGGCCGCCACCAGCTCGTCGAATTCATGGATCAGATTGCCGCCTGTGACTTACAACTGAAGCGCATTAAAAAGCGTCTGAGTCAAAATACCCTGTCAGAGAATGTCCGGCGCGAACTGCTGGCCGAGGAAAAGAAAATTCGCGCCAGGTTGTCTGGTCGAGCGGATCCGTCAAGCGCAACGCGAAGCCACCGAATACTTGCAGGAATTGCAGATGTCCGAGGATGA
PROTEIN sequence
Length: 253
MAKRGKSSDMKMLISMGKEKGYLTYDEVNDILPPDVVSPEHIDDLMVLFGEMDIELVDADNGESNVEVMKVDDKELLEEEKSLALRETGGGHTDDPVRMYLREMGSIPLLTREGEVEIAKRIEDAQNRIIMAVIKNPLATKEVLHLRDKLKNGKLSPDELGVSAMADDDDDEVGWRVQGRHQLVEFMDQIAACDLQLKRIKKRLSQNTLSENVRRELLAEEKKIRARLSGRADPSSATRSHRILAGIADVRG*