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PLM1_60_coex_sep16_scaffold_7512_1

Organism: PLM1_60_coex_sep16_Tectomicrobia_59_6

near complete RP 42 / 55 MC: 1 BSCG 43 / 51 ASCG 12 / 38
Location: comp(2..805)

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 285.0
  • Bit_score: 282
  • Evalue 3.40e-73
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 259.0
  • Bit_score: 265
  • Evalue 1.20e-68
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 249.0
  • Bit_score: 364
  • Evalue 9.60e-98

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Taxonomy

RLO_Nitrospinae_39_15 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 804
ATGGCGAAGGTGGACATTACGCTGGATCTTAATAAGCACCGGCAGCGCAAGGATTACGCCAGGATCCCCACCGTCATTAATATTCCAAACTTGATCGAGGTGCAGAAGGACTCGTATACCCGATTCCTGCAGAAAGATCGTCATCCAAGGCAACGGGAGGACCGCGGCTTAGAATCGGTTTTTCGGAGCATCTTCCCCATCAGTGATTTCAACGAAGTCGCATTTCTCGAGTATGTCGGCTACGAAATTGGCACATGGGAATGCGATTGCGGGGAATATAAGAGCTTGGGTGGCGAAGGTGTTGAATGCGAAAAATGTGGGAAAAATCTCATTTACAAAGAAAAATATGGCATGGAAGAGTGCCGCCAGCGGGGCATGACGTATGCTGATCCATTGCGCATTATGGTTCAGTTGGTGGTGTCGGAACGGGACGAGGAAACGAGTGAGATTCGTATCCGCGATGTCAAAGAGCAAAAGGTCTATCTCGGGGAAATCCCCCTGATGACCGACAAAGGGACTTTCATCATCAACGGCACTGAGCGTGTCATCGTGAGCCAACTCCACCGCTCCCCTGGGGTGTTCTTCAGCGCCGAGAAGGTGCGTGGAGTGAGCGGCAATGTGGTGTACTCGGCTCGCATTATCCCGTATCGAGGCTCATGGCTCGATTTCGAGTTCGATAGTAAGGGAATGTTATTCGCTCGGATCGATCGCCGCCGTAAACTCCCGGTGACTGTCCTCCTGCAGGCCTTGGGTCATACGAATGAACAGGTGTTGCGCACCTTCTACCCCGTCGAACATGTGGTC
PROTEIN sequence
Length: 268
MAKVDITLDLNKHRQRKDYARIPTVINIPNLIEVQKDSYTRFLQKDRHPRQREDRGLESVFRSIFPISDFNEVAFLEYVGYEIGTWECDCGEYKSLGGEGVECEKCGKNLIYKEKYGMEECRQRGMTYADPLRIMVQLVVSERDEETSEIRIRDVKEQKVYLGEIPLMTDKGTFIINGTERVIVSQLHRSPGVFFSAEKVRGVSGNVVYSARIIPYRGSWLDFEFDSKGMLFARIDRRRKLPVTVLLQALGHTNEQVLRTFYPVEHVV