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PLM1_60_coex_sep16_scaffold_7512

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_7512_1
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(2..805)
DNA (804bp) protein (268aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6); K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA-directed RNA polymerase subunit beta
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
PLM1_60_coex_sep16_scaffold_7512_2
Desulfarculus baarsii, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(818..1201)
DNA (384bp) protein (128aa)
50S ribosomal protein L7/L12 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QKU0_DESB2
50S ribosomal protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source="Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 /; 2st14).;"
PLM1_60_coex_sep16_scaffold_7512_3
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1212..1748)
DNA (537bp) protein (179aa)
50S ribosomal protein L10 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LRE5_TEPAE
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
50S ribosomal protein L10
PLM1_60_coex_sep16_scaffold_7512_4
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1771..2478)
DNA (708bp) protein (236aa)
50S ribosomal protein L1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CKJ7_DESK7
50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
PLM1_60_coex_sep16_scaffold_7512_5
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2504..2929)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8A9W3_THEID
50S ribosomal protein L11
Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
PLM1_60_coex_sep16_scaffold_7512_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2939..3550)
DNA (612bp) protein (204aa)
Transcription termination/antitermination protein NusG Tax=Nitrospina gracilis 3/211 RepID=M1YYF6_9BACT
Transcription termination/antitermination protein nusG {ECO:0000256|RuleBase:RU000538}; Flags: Fragment;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
antitermination protein NusG
PLM1_60_coex_sep16_scaffold_7512_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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comp(3547..3741)
DNA (195bp) protein (65aa)
secE; preprotein translocase subunit secE bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
preprotein translocase subunit SecE
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
PLM1_60_coex_sep16_scaffold_7512_trna_1
unknown

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comp(3801..3874)
DNA (74bp)
transferRNA Trp
Displaying 8 items

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