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PLM1_60_coex_sep16_scaffold_5563

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_5563_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(11..754)
DNA (744bp) protein (248aa)
Ribosomal RNA small subunit methyltransferase E bin=GWC2_Methylomirabilis_70_24 species=Alkalilimnicola ehrlichii genus=Alkalilimnicola taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Ribosomal RNA small subunit methyltransferase E
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_5563_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(751..1635)
DNA (885bp) protein (295aa)
Ribosomal protein L11 methyltransferase bin=GWC2_Methylomirabilis_70_16 species=Alicyclobacillus hesperidum genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
50S ribosomal protein L11 methyltransferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_5563_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1635..2729)
DNA (1095bp) protein (365aa)
Chaperone protein DnaJ bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
molecular chaperone DnaJ
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_5563_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(2731..3222)
DNA (492bp) protein (164aa)
Protein GrpE bin=GWC2_Methylomirabilis_70_16 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
grpE; protein GrpE
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_5563_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(3454..4500)
DNA (1047bp) protein (349aa)
Heat-inducible transcription repressor hrcA bin=GWC2_Methylomirabilis_70_16 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hrcA; heat-inducible transcription repressor HrcA
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_5563_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(4515..5621)
DNA (1107bp) protein (369aa)
Coproporphyrinogen III oxidase bin=GWC2_Methylomirabilis_70_16 species=Corynebacterium genitalium genus=Corynebacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
coproporphyrinogen III oxidase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_5563_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(5660..6331)
DNA (672bp) protein (224aa)
Signal peptidase I bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
signal peptidase I
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_5563_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(6342..8024)
DNA (1683bp) protein (561aa)
Elongation factor 4 bin=GWC2_Methylomirabilis_70_24 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
lepA; GTP-binding protein LepA
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_5563_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(8099..9013)
DNA (915bp) protein (305aa)
Nucleotidyl transferase bin=GWC2_Methylomirabilis_70_24 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
nucleotidyl transferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_5563_10
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(9154..9327)
DNA (174bp) protein (58aa)
hypothetical protein; K09791 hypothetical protein bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_60_coex_sep16_scaffold_5563_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9324..10253)
DNA (930bp) protein (310aa)
galE; UDP-glucose 4-epimerase (EC:5.1.3.2)
UDP-glucose 4-epimerase bin=GWF2_Methylomirabilis_70_14 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_5563_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10250..12385)
DNA (2136bp) protein (712aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM1_60_coex_sep16_scaffold_5563_13
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(12511..13449)
DNA (939bp) protein (313aa)
ctaB; protoheme IX farnesyltransferase (EC:2.5.1.-)
Protoheme IX farnesyltransferase bin=GWC2_Methylomirabilis_70_16 species=Bdellovibrio bacteriovorus genus=Bdellovibrio taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_5563_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(13439..13792)
DNA (354bp) protein (118aa)
Cytochrome oxidase assembly bin=GWC2_Methylomirabilis_70_24 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 14 items

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