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PLM1_60_coex_sep16_scaffold_5894

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_5894_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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1..648
DNA (648bp) protein (216aa)
periplasmic-binding protein; K02016 iron complex transport system substrate-binding protein bin=bin7_NC10_sister species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
periplasmic binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_60_coex_sep16_scaffold_5894_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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806..2242
DNA (1437bp) protein (479aa)
Putative peptidase TldD bin=GWC2_Methylomirabilis_70_24 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
tldD; peptidase TldD
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_5894_3
unknown

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comp(2730..2984)
DNA (255bp) protein (85aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_5894_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3203..3457
DNA (255bp) protein (85aa)
Peptidase U62 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
microcin-processing peptidase 1
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_5894_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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3839..4156
DNA (318bp) protein (106aa)
Deoxyribonuclease bin=GWC2_Methylomirabilis_70_16 species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
DNAase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_5894_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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4153..4929
DNA (777bp) protein (259aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_5894_7
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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4926..6071
DNA (1146bp) protein (382aa)
Peptidase M20B, peptidase T bin=GWD2_Deltaproteobacteria_55_8 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptidase T-like protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_coex_sep16_scaffold_5894_8
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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6135..6929
DNA (795bp) protein (265aa)
alpha/beta hydrolase bin=bin7_NC10_sister species=Modestobacter marinus genus=Modestobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase
Tax=CSP1_6_Rokubacteria
PLM1_60_coex_sep16_scaffold_5894_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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6919..7914
DNA (996bp) protein (332aa)
Two-component response regulator bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_5894_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(7927..8202)
DNA (276bp) protein (92aa)
Fumarate reductase/succinate dehydrogenase flavoprotein-like protein Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1ARD8_RUBXD
tricarballylate dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 10 items

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