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PLM1_60_coex_sep16_scaffold_18644

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_18644_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(2..247)
DNA (246bp) protein (82aa)
ABC-type branched-chain amino acid transport system, periplasmic component bin=GWA2_Methylomirabilis_73_35 species=uncultured organism genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_18644_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(274..1161)
DNA (888bp) protein (296aa)
ABC-type branched-chain amino acid transport system, permease component bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
inner-membrane translocator
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_18644_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1312..2211)
DNA (900bp) protein (300aa)
Putative uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Anoxybacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_18644_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2204..3856)
DNA (1653bp) protein (551aa)
AMP-dependent synthetase and ligase bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fadD3; AMP-dependent synthetase and ligase
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_coex_sep16_scaffold_18644_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3799..4524)
DNA (726bp) protein (242aa)
ABC transporter related protein bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_60_coex_sep16_scaffold_18644_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(4521..4673)
DNA (153bp) protein (51aa)
ABC transporter related protein bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_60_coex_sep16_scaffold_18644_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(4684..5499)
DNA (816bp) protein (272aa)
Branched-chain amino acid ABC transporter ATPase bin=GWA2_Methylomirabilis_73_35 species=Caenispirillum salinarum genus=Caenispirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
livF1; branched-chain amino acid ABC transporter ATPase
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_60_coex_sep16_scaffold_18644_8
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5515..5664)
DNA (150bp) protein (50aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
branched-chain amino acid ABC transporter periplasmic protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Displaying 8 items

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