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PLM1_60_coex_sep16_scaffold_1272

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_1272_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

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comp(3..194)
DNA (192bp) protein (64aa)
Rhodanese domain protein bin=GWA2_Methylomirabilis_73_35 species=Kingella denitrificans genus=Kingella taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
moeB1; rhodanese-like domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM1_60_coex_sep16_scaffold_1272_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(340..1443)
DNA (1104bp) protein (368aa)
ABC-type spermidine/putrescine transport system, ATPase component bin=GWC2_Methylomirabilis_70_16 species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ABC transporter
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1272_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(1440..2609)
DNA (1170bp) protein (390aa)
Major facilitator superfamily transporter bin=GWC2_Methylomirabilis_70_16 species=Advenella kashmirensis genus=Advenella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
major facilitator superfamily transporter
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1272_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(2612..4174)
DNA (1563bp) protein (521aa)
Binding-protein-dependent transport system inner membrane component family protein 55 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Ferric iron ABC transporter, permease protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1272_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(4174..5589)
DNA (1416bp) protein (472aa)
Putative transmembrane protein bin=GWC2_Methylomirabilis_70_16 species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
transmembrane protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1272_6
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(5594..7099)
DNA (1506bp) protein (502aa)
Glycosyl transferase, group 1 bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
group 1 glycosyl transferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1272_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(7096..8016)
DNA (921bp) protein (307aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1272_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(8058..9410)
DNA (1353bp) protein (451aa)
Diguanylate cyclase bin=GWC2_Methylomirabilis_70_16 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
diguanylate cyclase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1272_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9418..9993)
DNA (576bp) protein (192aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Azospirillum lipoferum genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1272_10
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(9993..11477)
DNA (1485bp) protein (495aa)
TPR domain protein bin=GWC2_Methylomirabilis_70_16 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
tetratricopeptide TPR_2
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1272_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(11536..13677)
DNA (2142bp) protein (714aa)
Tetratricopeptide TPR_2 repeat protein bin=GWC2_Methylomirabilis_70_16 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
TPR repeats containing protein
Tax=GWC2_Rokubacteria_70_16_curated
Displaying 11 items

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