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PLM1_60_coex_sep16_scaffold_1869

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_1869_1
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(1..1761)
DNA (1761bp) protein (587aa)
multi-sensor signal transduction histidine kinase bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_coex_sep16_scaffold_1869_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(1821..2534)
DNA (714bp) protein (238aa)
ABC-type branched-chain amino acid transport systems, ATPase component bin=GWC2_Methylomirabilis_70_24 species=Pelotomaculum thermopropionicum genus=Pelotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
LivF; ABC-type branched-chain amino acid transport systems, ATPase component
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1869_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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comp(2512..3261)
DNA (750bp) protein (250aa)
ABC transporter related bin=GWA2_Methylomirabilis_73_35 species=Azospirillum brasilense genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative branched-chain amino acid ABC transporter, ATP-binding component (livG-like)
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_coex_sep16_scaffold_1869_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3258..4208)
DNA (951bp) protein (317aa)
ABC-type transport system permease protein (Probable substrate branched-chain amino acids) bin=GWC2_Methylomirabilis_70_24 species=Halosarcina pallida genus=Halosarcina taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
inner-membrane translocator
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1869_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(4205..5011)
DNA (807bp) protein (269aa)
Branched-chain amino acid ABC-type transport system, permease components bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
branched chain amino acid ABC transporter permease
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1869_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(5084..6364)
DNA (1281bp) protein (427aa)
ABC-type branched-chain amino acid transport systems bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ABC-type branched-chain amino acid transport systems, periplasmic component
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1869_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(6390..7541)
DNA (1152bp) protein (384aa)
Acyl-CoA dehydrogenase, short-chain specific bin=GWC2_Methylomirabilis_70_16 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
acyl-CoA dehydrogenase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1869_8
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(7538..8191)
DNA (654bp) protein (218aa)
3-hydroxybutyryl-CoA dehydrogenase bin=GWC2_Methylomirabilis_70_16 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
3-hydroxyacyl-CoA dehydrogenase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1869_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(8134..8430)
DNA (297bp) protein (99aa)
3-hydroxybutyryl-CoA dehydrogenase bin=GWF2_Methylomirabilis_70_14 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-hydroxybutyryl-CoA dehydrogenase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1869_10
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(8512..8739)
DNA (228bp) protein (76aa)
id=3970989 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1869_11
unknown

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comp(8745..8867)
DNA (123bp) protein (41aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_1869_12
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(8910..9446)
DNA (537bp) protein (179aa)
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase bin=GWC2_Methylomirabilis_70_16 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1869_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(9448..10203)
DNA (756bp) protein (252aa)
Putative hydrolase (HAD superfamily) bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
HAD family hydrolase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1869_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(10200..10859)
DNA (660bp) protein (220aa)
3-hydroxypropionyl-coenzyme A dehydratase bin=GWC2_Methylomirabilis_70_24 species=Afipia broomeae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
enoyl-CoA hydratase/isomerase
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 14 items

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