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PLM1_60_coex_sep16_scaffold_1880

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_1880_1
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1..105
DNA (105bp) protein (35aa)
Ribosomal RNA small subunit methyltransferase E bin=GWC2_Methylomirabilis_70_16 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1880_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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107..511
DNA (405bp) protein (135aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_60_coex_sep16_scaffold_1880_3
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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658..1587
DNA (930bp) protein (310aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase bin=GWC2_Methylomirabilis_70_24 species=uncultured Acidobacteria bacterium HF0770_27F21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1880_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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1689..2276
DNA (588bp) protein (196aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1880_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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2276..4519
DNA (2244bp) protein (748aa)
Sensor histidine kinase, HAMP and PAS domain-containing bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multi-sensor signal transduction histidine kinase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1880_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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4528..5892
DNA (1365bp) protein (455aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWC2_Methylomirabilis_70_24 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Fis family transcriptional regulator
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1880_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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5942..6898
DNA (957bp) protein (319aa)
Amidohydrolase bin=GWC2_Methylomirabilis_70_16 species=Enterococcus faecalis genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
N-acyl-D-amino acid deacylase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_1880_8
R_Rokubacteria_71_18, Rokubacteria, Bacteria

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6838..7050
DNA (213bp) protein (71aa)
Amidohydrolase bin=GWC2_Methylomirabilis_70_16 species=Enterococcus faecalis genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
amidohydrolase family protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_60_coex_sep16_scaffold_1880_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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7115..10486
DNA (3372bp) protein (1124aa)
Adenylyl cyclase class-3/4/guanylyl cyclase:Tetratricopeptide TPR_4 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ATP synthase subunit beta
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_coex_sep16_scaffold_1880_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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10576..11202
DNA (627bp) protein (209aa)
hypothetical protein bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_coex_sep16_scaffold_1880_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

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11298..13454
DNA (2157bp) protein (719aa)
Bacillolysin bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
fungalysin metallopeptidase family protein
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_coex_sep16_scaffold_1880_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(13441..14436)
DNA (996bp) protein (332aa)
Alcohol dehydrogenase GroES domain protein bin=GWF2_Methylomirabilis_70_14 species=Rhizobium sp. PDO1-076 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
zinc-containing alcohol dehydrogenase superfamily
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_1880_13
Achromobacter sp. RTa, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14433..15359)
DNA (927bp) protein (309aa)
Luciferase family protein Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1AYH3_PARDP
Luciferase {ECO:0000313|EMBL:KGD86823.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;"
luciferase family protein
Displaying 13 items

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