ggKbase home page

PLM1_60_coex_sep16_scaffold_15249

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_15249_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

66..1052
DNA (987bp) protein (329aa)
hypothetical protein; K01989 putative ABC transport system substrate-binding protein bin=bin7_NC10_sister species=Bradyrhizobium japonicum genus=Bradyrhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM1_60_coex_sep16_scaffold_15249_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1123..1329)
DNA (207bp) protein (69aa)
1,4-dihydroxy-2-naphthoate synthase (EC:4.1.3.36)
1,4-Dihydroxy-2-naphthoate synthase bin=GWC2_Methylomirabilis_70_16 species=Mycobacterium smegmatis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_15249_3
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(1314..1886)
DNA (573bp) protein (191aa)
1,4-Dihydroxy-2-naphthoate synthase (EC:4.1.3.36) bin=bin7_NC10_sister species=Mycobacterium smegmatis genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
crotonase
Tax=CSP1_6_Rokubacteria
PLM1_60_coex_sep16_scaffold_15249_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1924..2703)
DNA (780bp) protein (260aa)
Magnesium-dependent deoxyribonuclease, TatD family, and radical SAM domain iron-sulfur oxidoreductase bin=GWC2_Methylomirabilis_70_16 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
magnesium-dependent deoxyribonuclease
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_15249_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2703..4007)
DNA (1305bp) protein (435aa)
Putative uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM1_60_coex_sep16_scaffold_15249_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4017..4928)
DNA (912bp) protein (304aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Pseudomonas sp. M47T1 genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_15249_7
unknown

Not on your lists

comp(4925..5680)
DNA (756bp) protein (252aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_15249_8
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists


comp(5680..6666)
DNA (987bp) protein (329aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase bin=GWA2_Methylomirabilis_73_35 species=Marinithermus hydrothermalis genus=Marinithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_73_35_curated
Displaying 8 items

View Taxonomy