ggKbase home page

PLM1_60_coex_sep16_scaffold_6265

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_6265_1
unknown

Not on your lists

2..169
DNA (168bp) protein (56aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_6265_2
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

510..902
DNA (393bp) protein (131aa)
Putative Fimbrial protein pilin bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fimbrial protein pilin
Tax=GWA2_Rokubacteria_73_35_curated
PLM1_60_coex_sep16_scaffold_6265_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

1008..1991
DNA (984bp) protein (328aa)
Galactose-1-phosphate uridylyltransferase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
galactose-1-phosphate uridylyltransferase
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_6265_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2153..2593
DNA (441bp) protein (147aa)
Putative Transcription factor IscR bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative transcription factor IscR
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_6265_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

2614..3840
DNA (1227bp) protein (409aa)
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase bin=GWF2_Methylomirabilis_70_14 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_6265_6
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

3901..4317
DNA (417bp) protein (139aa)
scaffold protein bin=GWC2_Methylomirabilis_70_16 species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
nitrogen fixation protein, NifU-like protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_60_coex_sep16_scaffold_6265_7
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

4339..4647
DNA (309bp) protein (103aa)
Iron-sulfur cluster assembly protein IscA bin=GWC2_Methylomirabilis_70_16 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
iron-sulfur cluster assembly accessory protein
Tax=RBG_16_Actinobacteria_67_10_curated
PLM1_60_coex_sep16_scaffold_6265_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

4678..5274
DNA (597bp) protein (199aa)
Co-chaperone protein HscB (Hsc20) bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hscB; co-chaperone protein HscB
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_6265_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

5252..6208
DNA (957bp) protein (319aa)
Chaperone protein HscA (Hsc66) bin=GWC2_Methylomirabilis_70_24 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hscA; chaperone protein HscA
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 9 items

View Taxonomy