ggKbase home page

PLM1_60_coex_sep16_scaffold_6561

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_6561_1
unknown

Not on your lists

1..138
DNA (138bp) protein (46aa)

This feature has no annotations

PLM1_60_coex_sep16_scaffold_6561_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

378..1052
DNA (675bp) protein (225aa)
dienelactone hydrolase-like enzyme (EC:3.1.1.45)
Dienelactone hydrolase-like enzyme bin=GWC2_Methylomirabilis_70_24 species=Candidatus Chloracidobacterium thermophilum genus=Candidatus Chloracidobacterium taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_6561_3
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(1172..1666)
DNA (495bp) protein (165aa)
50S ribosomal protein L17 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rplQ; 50S ribosomal protein L17
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_6561_4
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(1663..2649)
DNA (987bp) protein (329aa)
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha bin=GWC2_Methylomirabilis_70_16 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_6561_5
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(2678..3301)
DNA (624bp) protein (208aa)
30S ribosomal protein S4 bin=GWF2_Methylomirabilis_70_14 species=Thermacetogenium phaeum genus=Thermacetogenium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
rpsD; 30S ribosomal protein S4
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_6561_6
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists


comp(3314..3742)
DNA (429bp) protein (143aa)
Ribosomal protein S11 bin=GWC2_Methylomirabilis_70_24 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
30S ribosomal protein S11
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_6561_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists


comp(3755..4159)
DNA (405bp) protein (135aa)
Ribosomal protein S13 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
SSU ribosomal protein S13P
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_6561_8
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4168..4281)
DNA (114bp) protein (38aa)
Translation initiation factor IF-1 bin=GWC2_Methylomirabilis_70_24 species=Natranaerobius thermophilus genus=Natranaerobius taxon_order=Natranaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_6561_9
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

comp(4379..4495)
DNA (117bp) protein (39aa)
Translation initiation factor IF-1 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
infA; translation initiation factor IF-1
Tax=GWA2_Rokubacteria_70_23_curated
Displaying 9 items

View Taxonomy