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PLM1_60_coex_sep16_scaffold_3070

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM1_60_coex_sep16_scaffold_3070_1
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(3..257)
DNA (255bp) protein (85aa)
id=3139740 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3070_2
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

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291..1037
DNA (747bp) protein (249aa)
hypothetical protein Tax=Paenibacillus ginsengihumi RepID=UPI00037B22CC
Methyltransferase type 11
Tax=RBG_16_Zixibacteria_53_22_curated
PLM1_60_coex_sep16_scaffold_3070_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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1047..1223
DNA (177bp) protein (59aa)
id=4342190 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM1_60_coex_sep16_scaffold_3070_4
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1396..1938
DNA (543bp) protein (181aa)
bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR bin=GWF2_Methylomirabilis_70_14 species=Halothermothrix orenii genus=Halothermothrix taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3070_5
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

1943..2869
DNA (927bp) protein (309aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3070_6
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

2866..4140
DNA (1275bp) protein (425aa)
pyrC; dihydroorotase (EC:3.5.2.3)
Dihydroorotase bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_60_coex_sep16_scaffold_3070_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

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4137..5261
DNA (1125bp) protein (375aa)
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5) bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
carA; carbamoyl phosphate synthetase, glutamine amidotransferase small subunit (EC:6.3.5.5)
Tax=CSP1_6_Rokubacteria
PLM1_60_coex_sep16_scaffold_3070_8
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

5266..5532
DNA (267bp) protein (89aa)
id=3102576 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
PLM1_60_coex_sep16_scaffold_3070_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

5544..6548
DNA (1005bp) protein (335aa)
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
PLM1_60_coex_sep16_scaffold_3070_10
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(6535..6783)
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1YID8_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
PLM1_60_coex_sep16_scaffold_3070_11
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

6979..8415
DNA (1437bp) protein (479aa)
carB; carbamoyl phosphate synthase, large subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase large chain bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3070_12
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

8402..9127
DNA (726bp) protein (242aa)
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase bin=GWF2_Methylomirabilis_70_14 species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3070_13
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9124..9738
DNA (615bp) protein (205aa)
uridine monophosphate synthetase (EC:4.1.1.23 2.4.2.10)
Orotate phosphoribosyltransferase bin=GWF2_Methylomirabilis_70_14 species=uncultured Chloroflexi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3070_14
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

9738..10268
DNA (531bp) protein (177aa)
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase bin=GWC2_Methylomirabilis_70_16 species=Acidimicrobium ferrooxidans genus=Acidimicrobium taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWA2_Rokubacteria_70_23_curated
PLM1_60_coex_sep16_scaffold_3070_15
R_OD1_58_14, Parcubacteria, Bacteria

Not on your lists

comp(10265..10669)
DNA (405bp) protein (135aa)
Putative uncharacterized protein bin=GWA1_ZB2_49_26 species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_58_14_curated
PLM1_60_coex_sep16_scaffold_3070_16
unknown

Not on your lists

10746..10964
DNA (219bp) protein (73aa)

This feature has no annotations

Displaying 16 items

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